PERF: an exhaustive algorithm for ultra-fast and efficient identification of microsatellites from large DNA sequences

Abstract Motivation Microsatellites or Simple Sequence Repeats (SSRs) are short tandem repeats of DNA motifs present in all genomes. They have long been used for a variety of purposes in the areas of population genetics, genotyping, marker-assisted selection and forensics. Numerous studies have high...

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Bibliographic Details
Published in:Bioinformatics 2018-03, Vol.34 (6), p.943-948
Main Authors: Avvaru, Akshay Kumar, Sowpati, Divya Tej, Mishra, Rakesh Kumar
Format: Article
Language:English
Subjects:
Algorithms
bioinformatics
computer software
DNA
forensic sciences
genes
Genome, Human
Genomics - methods
genotyping
Humans
marker-assisted selection
Microsatellite Repeats
nucleotide motifs
population genetics
Sequence Analysis, DNA - methods
Software
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