Conformation Analysis and Stereodynamics of Symmetrically ortho -Disubstituted Carvacrol Derivatives

• Published in: Molecules (Basel, Switzerland) Switzerland), 2024-04, Vol.29 (9), p.1962
• Main Authors: Đorđević Zlatković, Miljana R, Radulović, Niko S, Dangalov, Miroslav, Vassilev, Nikolay G
• Format: Article
• Language: English
• Subjects: carvacrol; DFT calculations; dynamic NMR; HOBS EXSY experiment; Natural products; NMR; Nuclear magnetic resonance; rotational barrier energy; Spectrum analysis
• ISSN: 1420-3049; 1420-3049
• DOI: 10.3390/molecules29091962

The design and synthesis of analogs of natural products can be a valuable source of medicinal preparations for the pharmaceutical industry. In the present study, the structural elucidation of eleven derivatives of 2,4-dihalogeno substituted synthetic analogues of the natural compound carvacrol was carried out by means of NMR experiments, and of another thirteen by DFT calculations. By selective NOE experiments and the irradiation of CH signals of the isopropyl group, individual conformers were assigned as and . By comparing GIAO/B3LYP/6-311++G(d,p)-calculated and experimentally measured vicinal spin-spin constants, this assignment was confirmed. An unusual relationship is reported for proton-carbon vicinal couplings: (180°) < (0°). The conformational mobility of carvacrols was studied by 2D EXSY spectra. The application of homonuclear decoupling technique (HOBS) to these spectra simplifies the spectra, improves resolution without reducing the sensitivity, and allows a systematic examination of the rotational barrier of all compounds via their CH signals of the isopropyl group in a wider temperature interval. The rate constants of the isopropyl rotation between and conformers were determined and the corresponding energy barriers (14-17 kcal/mol) were calculated. DFT calculations of the energy barriers in carvacrol derivatives allowed the determination of the steric origin of the restricted isopropyl rotation. The barrier height depends on the size of the 2- and 4-position substituents, and is independent of the derivatization of the OH group.