Precise grading of non-muscle invasive bladder cancer with multi-scale pyramidal CNN

• Published in: Scientific reports 2024-10, Vol.14 (1), p.25131-12, Article 25131
• Main Authors: Shalata, Aya T., Alksas, Ahmed, Shehata, Mohamed, Khater, Sherry, Ezzat, Osama, Ali, Khadiga M., Gondim, Dibson, Mahmoud, Ali, El-Gendy, Eman M., Mohamed, Mohamed A., Alghamdi, Norah S., Ghazal, Mohammed, El-Baz, Ayman
• Format: Article
• Language: English
• Subjects: 631/67/2321; 639/166/985; Algorithms; Artificial Intelligence; Artificial intelligence (AI) system; Benchmarks; Bladder cancer; Digital pathology; Ensemble machine learning; Histopathological images; Histopathology; Humanities and Social Sciences; Humans; Invasiveness; multidisciplinary; Neoplasm Grading; Neoplasm Invasiveness; Neural networks; Neural Networks, Computer; Non-muscle invasive bladder cancer (NMIBC); Non-Muscle Invasive Bladder Neoplasms; Pathology; Pyramidal convolutional neural networks (CNN); Science; Science (multidisciplinary); Urinary Bladder Neoplasms - pathology
• ISSN: 2045-2322; 2045-2322
• DOI: 10.1038/s41598-024-77101-6

The grading of non-muscle invasive bladder cancer (NMIBC) continues to face challenges due to subjective interpretations, which affect the assessment of its severity. To address this challenge, we are developing an innovative artificial intelligence (AI) system aimed at objectively grading NMIBC. This system uses a novel convolutional neural network (CNN) architecture called the multi-scale pyramidal pretrained CNN to analyze both local and global pathology markers extracted from digital pathology images. The proposed CNN structure takes as input three levels of patches, ranging from small patches (e.g., 128 × 128 ) to the largest size patches ( 512 × 512 ). These levels are then fused by random forest (RF) to estimate the severity grade of NMIBC. The optimal patch sizes and other model hyperparameters are determined using a grid search algorithm. For each patch size, the proposed system has been trained on 32K patches (comprising 16K low-grade and 16K high-grade samples) and subsequently tested on 8K patches (consisting of 4K low-grade and 4K high-grade samples), all annotated by two pathologists. Incorporating light and efficient processing, defining new benchmarks in the application of AI to histopathology, the ShuffleNet-based AI system achieved notable metrics on the testing data, including 94.25% ± 0.70% accuracy, 94.47% ± 0.93% sensitivity, 94.03% ± 0.95% specificity, and a 94.29% ± 0.70% F1-score. These results highlight its superior performance over traditional models like ResNet-18. The proposed system’s robustness in accurately grading pathology demonstrates its potential as an advanced AI tool for diagnosing human diseases in the domain of digital pathology.