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Metabolomics and transcriptomics of embryonic livers reveal hypoxia adaptation of Tibetan chickens

Exploring the hypoxia adaptation mechanism of Tibetan chicken is of great significance for revealing the survival law of Tibetan chicken and plateau animal husbandry production. To investigate the hypoxia adaptation of Tibetan chickens (TBCs), an integrative metabolomic-transcriptomic analysis of th...

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Published in:BMC genomics 2024-02, Vol.25 (1), p.131-131, Article 131
Main Authors: Xue, Mingming, Yu, Runjie, Yang, Lixian, Xie, Fuyin, Fang, Meiying, Tang, Qiguo
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Yu, Runjie
Yang, Lixian
Xie, Fuyin
Fang, Meiying
Tang, Qiguo
description Exploring the hypoxia adaptation mechanism of Tibetan chicken is of great significance for revealing the survival law of Tibetan chicken and plateau animal husbandry production. To investigate the hypoxia adaptation of Tibetan chickens (TBCs), an integrative metabolomic-transcriptomic analysis of the liver on day 18 of embryonic development was performed. Dwarf laying chickens (DLCs), a lowland breed, were used as a control. A total of 1,908 metabolites were identified in both TBCs and DLCs. Energy metabolism and amino acid metabolism related differentially regulated metabolites (DRMs) were significantly enriched under hypoxia. Important metabolic pathways including the TCA cycle and arginine and proline metabolism were screened; PCK1, SUCLA2, and CPS1 were found to be altered under hypoxic conditions. In addition, integrated analysis suggested potential differences in mitochondrial function, which may play a crucial role in the study of chicken oxygen adaptation. These results suggest that hypoxia changed the gene expression and metabolic patterns of embryonic liver of TBCs compared to DLCs. Our study provides a basis for uncovering the molecular regulation mechanisms of hypoxia adaptation in TBCs with the potential application of hypoxia adaptation research for other animals living on the Qinghai-Tibet plateau, and may even contribute to the study of diseases caused by hypoxia.
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subjects Adaptation
Adaptation (Physiology)
Altitude
Amino acids
Animal husbandry
Animal production
Biosynthesis
Chickens
Complications and side effects
Discriminant analysis
Embryogenesis
Embryonic development
Embryonic growth stage
Embryonic liver
Energy metabolism
Fatty acids
Gene expression
Genetic aspects
Health aspects
Hypoxia
Lipids
Liver
Mass spectrometry
Metabolic pathways
Metabolism
Metabolites
Metabolomics
Methods
Physiology
Poultry
RNA sequencing
Scientific imaging
Tibetan chickens
Transcriptomics
Tricarboxylic acid cycle
title Metabolomics and transcriptomics of embryonic livers reveal hypoxia adaptation of Tibetan chickens
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