Eustigmatophyte model of red-shifted chlorophyll a absorption in light-harvesting complexes

• Published in: Communications biology 2024-10, Vol.7 (1), p.1406-12, Article 1406
• Main Authors: Agostini, Alessandro, Bína, David, Barcytė, Dovilė, Bortolus, Marco, Eliáš, Marek, Carbonera, Donatella, Litvín, Radek
• Format: Article
• Language: English
• Subjects: 631/449/1734/2077; 631/57/1464; Acclimation; Algae; Amino acid substitution; Asparagine; Biomedical and Life Sciences; Biotechnology; Carotenoids; Chlorophyll; Chlorophyll - metabolism; Chlorophyll A - chemistry; Chlorophyll A - metabolism; Electron spin resonance; Electron Spin Resonance Spectroscopy; Histidine; Life Sciences; Light; Light-Harvesting Protein Complexes - chemistry; Light-Harvesting Protein Complexes - genetics; Light-Harvesting Protein Complexes - metabolism; Magnesium; Optically detected magnetic resonance; Phylogeny; Pigments
• ISSN: 2399-3642; 2399-3642
• DOI: 10.1038/s42003-024-07101-9

Photosynthetic organisms harvest light for energy. Some eukaryotic algae have specialized in harvesting far-red light by tuning chlorophyll a absorption through a mechanism still to be elucidated. Here, we combined optically detected magnetic resonance and pulsed electron paramagnetic resonance measurements on red-adapted light-harvesting complexes, rVCP, isolated from the freshwater eustigmatophyte alga Trachydiscus minutus to identify the location of the pigments responsible for this remarkable adaptation. The pigments have been found to belong to an excitonic cluster of chlorophylls a at the core of the complex, close to the central carotenoids in L1/L2 sites. A pair of structural features of the Chl a 403/ a 603 binding site, namely the histidine-to-asparagine substitution in the magnesium-ligation residue and the small size of the amino acid at the i -4 position, resulting in a [A/G]xxxN motif, are proposed to be the origin of this trait. Phylogenetic analysis of various eukaryotic red antennae identified several potential LHCs that could share this tuning mechanism. This knowledge of the red light acclimation mechanism in algae is a step towards rational design of algal strains in order to enhance light capture and efficiency in large-scale biotechnology applications. A histidine-to-asparagine exchange and a small-sidechain residue at the i -4 position of the chlorophyll a 403/ a 603 binding sites are responsible for the red-shifted light adaption of the light harvesting complexes from Trachydiscus minutus and other eukaryotic algae.