MaxDIA enables library-based and library-free data-independent acquisition proteomics

MaxDIA is a software platform for analyzing data-independent acquisition (DIA) proteomics data within the MaxQuant software environment. Using spectral libraries, MaxDIA achieves deep proteome coverage with substantially better coefficients of variation in protein quantification than other software....

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Bibliographic Details
Published in:	Nature biotechnology 2021-12, Vol.39 (12), p.1563-1573
Main Authors:	Sinitcyn, Pavel, Hamzeiy, Hamid, Salinas Soto, Favio, Itzhak, Daniel, McCarthy, Frank, Wichmann, Christoph, Steger, Martin, Ohmayer, Uli, Distler, Ute, Kaspar-Schoenefeld, Stephanie, Prianichnikov, Nikita, Yılmaz, Şule, Rudolph, Jan Daniel, Tenzer, Stefan, Perez-Riverol, Yasset, Nagaraj, Nagarjuna, Humphrey, Sean J., Cox, Jürgen
Format:	Article
Language:	English
Subjects:	631/114/2784 631/45/475 Agriculture Analysis Bioinformatics Biomedical and Life Sciences Biomedical Engineering/Biotechnology Biomedicine Biotechnology Coefficient of variation Computer programs Data analysis Freight cars Ionic mobility Learning algorithms Libraries Life Sciences Machine learning Matching Methods New technology Peptide Library Proteins Proteome - analysis Proteomes Proteomics Proteomics - methods Software Spectrometry Workflow
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