Investigating the role of GXXXG motifs in helical folding and self-association of plasticins, Gly/Leu-rich antimicrobial peptides

• Published in: Biophysical chemistry 2015-01, Vol.196, p.40-52
• Main Authors: Carlier, Ludovic, Joanne, Pierre, Khemtémourian, Lucie, Lacombe, Claire, Nicolas, Pierre, El Amri, Chahrazade, Lequin, Olivier
• Format: Article
• Language: English
• Subjects: Amino Acid Motifs; Antimicrobial Cationic Peptides - chemical synthesis; Antimicrobial Cationic Peptides - chemistry; Antimicrobial Cationic Peptides - metabolism; Antimicrobial peptide; Calorimetry; Chemical Sciences; Circular Dichroism; Cross-linking reaction; Diffusion; Eye Proteins - chemical synthesis; Eye Proteins - chemistry; Eye Proteins - metabolism; Glycine - chemistry; ITC; Leucine - chemistry; Liposomes - chemistry; Liposomes - metabolism; Liquid-state NMR; Magnetic Resonance Spectroscopy; Membrane mimetics; Molecular Sequence Data; Nerve Tissue Proteins - chemical synthesis; Nerve Tissue Proteins - chemistry; Nerve Tissue Proteins - metabolism; Organic chemistry; Pachymedusa dacnicolor; Phyllomedusa bicolor; Protein Binding; Protein Folding; Protein Structure, Secondary; Thermodynamics
• ISSN: 0301-4622; 1873-4200
• DOI: 10.1016/j.bpc.2014.09.004

Plasticins (PTC) are dermaseptin-related antimicrobial peptides characterized by a large number of leucine and glycine residues arranged in GXXXG motifs that are often described to promote helix association within biological membranes. We report the structure and interaction properties of two plasticins, PTC-B1 from Phyllomedusa bicolor and a cationic analog of PTC-DA1 from Pachymedusa dacnicolor, which exhibit membrane-lytic activities on a broad range of microorganisms. Despite a high number of glycine, CD and NMR spectroscopy show that the two plasticins adopt mainly alpha-helical conformations in a wide variety of environments such as trifluoroethanol, detergent micelles and lipid vesicles. In DPC and SDS, plasticins adopt well-defined helices that lie parallel to the micelle surface, all glycine residues being located on the solvent-exposed face. Spectroscopic data and cross-linking experiments indicate that the GXXXG repeats in these amphipathic helices do not provide a strong oligomerization interface, suggesting a different role from GXXXG motifs found in transmembrane helices. [Display omitted] •Plasticins have much higher affinity for anionic lipids than zwitterionic lipids.•The two Gly-rich plasticins fold into well-defined helices in membrane environments.•In micelles, Gly residues are located on the polar face of the amphipathic helix.•GXXXG motifs in plasticins do not promote strong association between helices.•The role of GXXXG motifs in plasticin could differ from that in transmembrane helices.