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Time-course analysis of DNA damage response-related genes after in vitro radiation in H460 and H1229 lung cancer cell lines
Radiation is the most useful treatment modality for cancer patients. It initiates a series of signal cascades such as DNA damage response (DDR) signaling for repairing damaged DNA, arresting the cell cycle, and inducing cell death. Until now, few genes have been found to be regulated by radiation, w...
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Published in: | Experimental & molecular medicine 2011, 43(7), , pp.419-426 |
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creator | Kim, Kang Ho Yoo, Hae Yong Joo, Kyeung Min Jung, Yong Jin, Juyoun Kim, Yonghyun Yoon, Su Jin Choi, Seung Ho Seol, Ho Jun Park, Woong-Yang Nam, Do-Hyun |
description | Radiation is the most useful treatment modality for cancer patients. It initiates a series of signal cascades such as DNA damage response (DDR) signaling for repairing damaged DNA, arresting the cell cycle, and inducing cell death. Until now, few genes have been found to be regulated by radiation, which explains the molecular mechanisms of cellular responses to radiation. Although the transcriptional changes caused by radiation have been widely investigated, little is known about the direct evidence for the transcriptional control of DDR-related genes. Here, we examined the radiosensitivity of two non-small cell lung cancer cell lines (H460 and H1299), which have different p53 status. We monitored the time-dependent changes of 24 DDR-related gene expressions via microarray analysis. Based on the basal expression levels and temporal patterns, we further classified 24 DDR-related genes into four subgroups. Then, we also addressed the protein levels of several DDR-related genes such as TopBP1, Chk1 and Chk2, confirming the results of microarray analysis. Together, these results indicate that the expression patterns of DDR-related genes are associated with radiosensitivity and with the p53 statuses of H460 and H1299, which adds to the understanding of the complex biological responses to radiation. |
doi_str_mv | 10.3858/emm.2011.43.7.046 |
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It initiates a series of signal cascades such as DNA damage response (DDR) signaling for repairing damaged DNA, arresting the cell cycle, and inducing cell death. Until now, few genes have been found to be regulated by radiation, which explains the molecular mechanisms of cellular responses to radiation. Although the transcriptional changes caused by radiation have been widely investigated, little is known about the direct evidence for the transcriptional control of DDR-related genes. Here, we examined the radiosensitivity of two non-small cell lung cancer cell lines (H460 and H1299), which have different p53 status. We monitored the time-dependent changes of 24 DDR-related gene expressions via microarray analysis. Based on the basal expression levels and temporal patterns, we further classified 24 DDR-related genes into four subgroups. Then, we also addressed the protein levels of several DDR-related genes such as TopBP1, Chk1 and Chk2, confirming the results of microarray analysis. Together, these results indicate that the expression patterns of DDR-related genes are associated with radiosensitivity and with the p53 statuses of H460 and H1299, which adds to the understanding of the complex biological responses to radiation.</description><identifier>ISSN: 1226-3613</identifier><identifier>EISSN: 2092-6413</identifier><identifier>DOI: 10.3858/emm.2011.43.7.046</identifier><identifier>PMID: 21633183</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>Adaptor Proteins, Signal Transducing - genetics ; Biomedical and Life Sciences ; Biomedicine ; Cell Cycle Proteins - genetics ; Cell Line, Tumor ; Cell Survival - radiation effects ; DNA Damage - radiation effects ; DNA Repair Enzymes - genetics ; DNA-Binding Proteins - genetics ; Gene Expression Profiling ; Gene Expression Regulation, Neoplastic - radiation effects ; Humans ; Lung cancer ; Lung Neoplasms ; Medical Biochemistry ; Molecular Medicine ; Original ; Radiation Tolerance - genetics ; Signal Transduction ; Stem Cells ; 생화학</subject><ispartof>Experimental and Molecular Medicine, 2011, 43(7), , pp.419-426</ispartof><rights>The Author(s) 2011</rights><rights>Copyright Nature Publishing Group Jul 2011</rights><rights>Copyright © 2011 Korean Society for Biochemistry and Molecular Biology 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c493t-bcfc8c88202b92f392445eea9c1409c231b279904041e882cda193da41292c3</citedby><cites>FETCH-LOGICAL-c493t-bcfc8c88202b92f392445eea9c1409c231b279904041e882cda193da41292c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1800267361/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1800267361?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21633183$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART001573002$$DAccess content in National Research Foundation of Korea (NRF)$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Kang Ho</creatorcontrib><creatorcontrib>Yoo, Hae Yong</creatorcontrib><creatorcontrib>Joo, Kyeung Min</creatorcontrib><creatorcontrib>Jung, Yong</creatorcontrib><creatorcontrib>Jin, Juyoun</creatorcontrib><creatorcontrib>Kim, Yonghyun</creatorcontrib><creatorcontrib>Yoon, Su Jin</creatorcontrib><creatorcontrib>Choi, Seung Ho</creatorcontrib><creatorcontrib>Seol, Ho Jun</creatorcontrib><creatorcontrib>Park, Woong-Yang</creatorcontrib><creatorcontrib>Nam, Do-Hyun</creatorcontrib><title>Time-course analysis of DNA damage response-related genes after in vitro radiation in H460 and H1229 lung cancer cell lines</title><title>Experimental & molecular medicine</title><addtitle>Exp Mol Med</addtitle><addtitle>Exp Mol Med</addtitle><description>Radiation is the most useful treatment modality for cancer patients. It initiates a series of signal cascades such as DNA damage response (DDR) signaling for repairing damaged DNA, arresting the cell cycle, and inducing cell death. Until now, few genes have been found to be regulated by radiation, which explains the molecular mechanisms of cellular responses to radiation. Although the transcriptional changes caused by radiation have been widely investigated, little is known about the direct evidence for the transcriptional control of DDR-related genes. Here, we examined the radiosensitivity of two non-small cell lung cancer cell lines (H460 and H1299), which have different p53 status. We monitored the time-dependent changes of 24 DDR-related gene expressions via microarray analysis. Based on the basal expression levels and temporal patterns, we further classified 24 DDR-related genes into four subgroups. Then, we also addressed the protein levels of several DDR-related genes such as TopBP1, Chk1 and Chk2, confirming the results of microarray analysis. Together, these results indicate that the expression patterns of DDR-related genes are associated with radiosensitivity and with the p53 statuses of H460 and H1299, which adds to the understanding of the complex biological responses to radiation.</description><subject>Adaptor Proteins, Signal Transducing - genetics</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cell Cycle Proteins - genetics</subject><subject>Cell Line, Tumor</subject><subject>Cell Survival - radiation effects</subject><subject>DNA Damage - radiation effects</subject><subject>DNA Repair Enzymes - genetics</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Neoplastic - radiation effects</subject><subject>Humans</subject><subject>Lung cancer</subject><subject>Lung Neoplasms</subject><subject>Medical Biochemistry</subject><subject>Molecular Medicine</subject><subject>Original</subject><subject>Radiation Tolerance - genetics</subject><subject>Signal Transduction</subject><subject>Stem Cells</subject><subject>생화학</subject><issn>1226-3613</issn><issn>2092-6413</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNp9kktv1DAUhS0EotOBH8AGWWIBLDL4FcfeII3KYypVIMHsLY9zE9wmzmAnlSr-fJ2ZUhUkWFny_c7xvb4HoReUrLgq1Tvo-xUjlK4EX1UrIuQjtGBEs0IKyh-jBWVMFlxSfoJOU7okhJWiEk_RCaOSc6r4Av3a-h4KN0wxAbbBdjfJJzw0-MOXNa5tb1vAEdJ-CAmKCJ0docYtBEjYNiNE7AO-9mMccLS1t6Mfwny1EZJkuxpvcg8ad1NosbPBZYGDrsOdzw7P0JPGdgme351L9P3Tx-3Zprj4-vn8bH1ROKH5WOxc45RTihG206zhmglRAljtqCDaMU53rNKaCCIoZMzVlmpeW0GZZo4v0duja4iNuXLeDNYfznYwV9Gsv23PDSVKU1Vl9v2R3U-7HmoHYYy2M_voextvDso_K8H_yD7XhtNSlYRmg9d3BnH4OUEaTe_TPLENMEzJKJUhXUqZyTf_JakiSkqSfyCjr_5CL_O-8q4OFGGymne8RPRIuTikFKG5b5sSM8fF5LiYOS5GcFOZHJeseflw3nvF73xkgB2BlEuhhfjg6X-63gIP88oL</recordid><startdate>20110701</startdate><enddate>20110701</enddate><creator>Kim, Kang Ho</creator><creator>Yoo, Hae Yong</creator><creator>Joo, Kyeung Min</creator><creator>Jung, Yong</creator><creator>Jin, Juyoun</creator><creator>Kim, Yonghyun</creator><creator>Yoon, Su Jin</creator><creator>Choi, Seung Ho</creator><creator>Seol, Ho Jun</creator><creator>Park, Woong-Yang</creator><creator>Nam, Do-Hyun</creator><general>Nature Publishing Group UK</general><general>Springer Nature B.V</general><general>Korean Society for Biochemistry and Molecular Biology</general><general>생화학분자생물학회</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7T5</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>ACYCR</scope></search><sort><creationdate>20110701</creationdate><title>Time-course analysis of DNA damage response-related genes after in vitro radiation in H460 and H1229 lung cancer cell lines</title><author>Kim, Kang Ho ; Yoo, Hae Yong ; Joo, Kyeung Min ; Jung, Yong ; Jin, Juyoun ; Kim, Yonghyun ; Yoon, Su Jin ; Choi, Seung Ho ; Seol, Ho Jun ; Park, Woong-Yang ; Nam, Do-Hyun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c493t-bcfc8c88202b92f392445eea9c1409c231b279904041e882cda193da41292c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Adaptor Proteins, Signal Transducing - genetics</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Cell Cycle Proteins - genetics</topic><topic>Cell Line, Tumor</topic><topic>Cell Survival - radiation effects</topic><topic>DNA Damage - radiation effects</topic><topic>DNA Repair Enzymes - genetics</topic><topic>DNA-Binding Proteins - genetics</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation, Neoplastic - radiation effects</topic><topic>Humans</topic><topic>Lung cancer</topic><topic>Lung Neoplasms</topic><topic>Medical Biochemistry</topic><topic>Molecular Medicine</topic><topic>Original</topic><topic>Radiation Tolerance - genetics</topic><topic>Signal Transduction</topic><topic>Stem Cells</topic><topic>생화학</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Kang Ho</creatorcontrib><creatorcontrib>Yoo, Hae Yong</creatorcontrib><creatorcontrib>Joo, Kyeung Min</creatorcontrib><creatorcontrib>Jung, Yong</creatorcontrib><creatorcontrib>Jin, Juyoun</creatorcontrib><creatorcontrib>Kim, Yonghyun</creatorcontrib><creatorcontrib>Yoon, Su Jin</creatorcontrib><creatorcontrib>Choi, Seung Ho</creatorcontrib><creatorcontrib>Seol, Ho Jun</creatorcontrib><creatorcontrib>Park, Woong-Yang</creatorcontrib><creatorcontrib>Nam, Do-Hyun</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest Biological Science Journals</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Korean Citation Index</collection><jtitle>Experimental & molecular medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Kang Ho</au><au>Yoo, Hae Yong</au><au>Joo, Kyeung Min</au><au>Jung, Yong</au><au>Jin, Juyoun</au><au>Kim, Yonghyun</au><au>Yoon, Su Jin</au><au>Choi, Seung Ho</au><au>Seol, Ho Jun</au><au>Park, Woong-Yang</au><au>Nam, Do-Hyun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Time-course analysis of DNA damage response-related genes after in vitro radiation in H460 and H1229 lung cancer cell lines</atitle><jtitle>Experimental & molecular medicine</jtitle><stitle>Exp Mol Med</stitle><addtitle>Exp Mol Med</addtitle><date>2011-07-01</date><risdate>2011</risdate><volume>43</volume><issue>7</issue><spage>419</spage><epage>426</epage><pages>419-426</pages><issn>1226-3613</issn><eissn>2092-6413</eissn><abstract>Radiation is the most useful treatment modality for cancer patients. It initiates a series of signal cascades such as DNA damage response (DDR) signaling for repairing damaged DNA, arresting the cell cycle, and inducing cell death. Until now, few genes have been found to be regulated by radiation, which explains the molecular mechanisms of cellular responses to radiation. Although the transcriptional changes caused by radiation have been widely investigated, little is known about the direct evidence for the transcriptional control of DDR-related genes. Here, we examined the radiosensitivity of two non-small cell lung cancer cell lines (H460 and H1299), which have different p53 status. We monitored the time-dependent changes of 24 DDR-related gene expressions via microarray analysis. Based on the basal expression levels and temporal patterns, we further classified 24 DDR-related genes into four subgroups. Then, we also addressed the protein levels of several DDR-related genes such as TopBP1, Chk1 and Chk2, confirming the results of microarray analysis. 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subjects | Adaptor Proteins, Signal Transducing - genetics Biomedical and Life Sciences Biomedicine Cell Cycle Proteins - genetics Cell Line, Tumor Cell Survival - radiation effects DNA Damage - radiation effects DNA Repair Enzymes - genetics DNA-Binding Proteins - genetics Gene Expression Profiling Gene Expression Regulation, Neoplastic - radiation effects Humans Lung cancer Lung Neoplasms Medical Biochemistry Molecular Medicine Original Radiation Tolerance - genetics Signal Transduction Stem Cells 생화학 |
title | Time-course analysis of DNA damage response-related genes after in vitro radiation in H460 and H1229 lung cancer cell lines |
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