The mechanism research on the anti‐liver fibrosis of emodin based on network pharmacology

• Published in: IUBMB life 2021-09, Vol.73 (9), p.1166-1179
• Main Authors: Liang, Baoyu, Gao, Liyuan, Wang, Feixia, Li, Zhanghao, Li, Yujia, Tan, Shanzhong, Chen, Anping, Shao, Jiangjuan, Zhang, Zili, Sun, Lixia, Zhang, Feng, Zheng, Shizhong
• Format: Article
• Language: English
• Subjects: Animals; Apoptosis; Apoptosis - drug effects; Binding sites; Carbon tetrachloride; Carbon Tetrachloride - toxicity; Caspases - metabolism; Emodin; Emodin - pharmacology; ERK; Extracellular signal-regulated kinase; Fibrosis; Hepatic Stellate Cells - drug effects; Hepatic Stellate Cells - metabolism; Hepatic Stellate Cells - pathology; Humans; Kinases; Liver; Liver Cirrhosis - chemically induced; Liver Cirrhosis - drug therapy; Liver Cirrhosis - metabolism; Liver Cirrhosis - pathology; liver fibrosis; Male; MAP kinase; MAP Kinase Signaling System - drug effects; Mice; Mice, Inbred ICR; Molecular Docking Simulation; Molecular Sequence Annotation; network pharmacology; Network Pharmacology - methods; p38; p53; p53 Protein; Protein kinase; Stellate cells; Tumor Suppressor Protein p53 - chemistry; Tumor Suppressor Protein p53 - metabolism
• ISSN: 1521-6543; 1521-6551
• DOI: 10.1002/iub.2523

Aims This study was designated to illustrate the underlying mechanisms of emodin anti‐liver fibrosis via network pharmacology and experiment. Methods The TSMCP and Genecards database were applied to screen the relevant targets of emodin or liver fibrosis. The essential target was selected by using Cytoscape to analyze the topological network of potential targets. Furthermore, we constructed a preliminary molecule docking study to explore the binding site by Surflex‐Dock suite SYBYL X 2.0. The DAVID database was selected for gene functional annotations and KEGG enrichment analysis. Moreover, we demonstrated the ameliorating effect of emodin on carbon tetrachloride (CCl4)‐induced liver injury in mice. We also verified the network predictions in vitro via various techniques. Results The collected results showed that 35 targets were related to emodin, and 6,198 targets were associated with liver fibrosis. The Venn analysis revealed that 17 intersection targets were correlated with emodin anti‐liver fibrosis. The topological network analysis suggested that the p53 was the remarkable crucial target. Besides, the molecule docking results showed that emodin could directly interact with p53 by binding the active site residues ASN345, GLN331, and TYR347. Finally, KEGG pathway enrichment results indicated that essential genes were mainly enriched in mitogen‐activated protein kinase (MAPK) signaling pathways. Moreover, our study confirmed that emodin alleviated CCl4‐induced liver injury in mice, inducing hepatic stellate cells (HSCs) apoptosis via regulating the p53/ERK/p38 axis. Conclusions This study partially verified the network pharmacological prediction of emodin inducing HSCs cell apoptosis through the p53/ERK/p38 axis.