Identification of novel cytochrome P450 1A genes from five marine mammal species

• Published in: Aquatic toxicology 2000-12, Vol.51 (2), p.145-153
• Main Authors: Teramitsu, Ikuko, Yamamoto, Yukio, Chiba, Issei, Iwata, Hisato, Tanabe, Shinsuke, Fujise, Yoshihiro, Kazusaka, Akio, Akahori, Fumiaki, Fujita, Shoichi
• Format: Article
• Language: English
• Subjects: Amino Acid Sequence; Animal, plant and microbial ecology; Animals; Applied ecology; Balaenoptera acutorostrata; Base Sequence; Biological and medical sciences; Conserved Sequence; CYP1A gene; Cytochrome P-450 1A; Cytochrome P-450 Enzyme System - genetics; cytochrome P450; Degenerate polymerase chain reaction; Ecotoxicology, biological effects of pollution; Effects of pollution and side effects of pesticides on vertebrates; Eumetopias jubatus; Fundamental and applied biological sciences. Psychology; Genes. Genome; Isoenzymes - metabolism; Mammalia; Marine mammals; Molecular and cellular biology; Molecular genetics; Molecular Sequence Data; Oligonucleotides - chemistry; Phoca fasciata; Phoca largha; Phocoenoides dalli; Phylogenetic analysis; Porpoises - physiology; Reverse Transcriptase Polymerase Chain Reaction; RNA - biosynthesis; RNA - isolation & purification; Seals, Earless - physiology; Whales - genetics
• ISSN: 0166-445X; 1879-1514
• DOI: 10.1016/S0166-445X(00)00113-2

Marine mammals, being endangered by the chronic exposure of hydrophobic environmental contaminants as an assorting result of global pollution, are especially focused as indicators for organochlorine pollution. The use of contaminant-induced xenobiotic metabolizers, particularly P450 (CYP) 1A, in marine mammals can be effective as potential biomarkers of the contaminant exposure and/or toxic effects. In this study, we identified the first marine mammalian CYPs. Six novel CYP1A cDNA fragments were cloned from the livers of marine mammal species, minke whale ( Balaenoptera acutorostrata), dall's porpoise ( Phocoenoides dalli), steller sea lion ( Eumetopias jubatus), largha seal ( Phoca largha), and ribbon seal ( Phoca fasciata) by the method of reverse transcription/polymerase chain reaction (RT/PCR); two distinct fragments were from steller sea lion and one fragment each was obtained from the other species. Five of the fragments, one from each species, were classified in the subfamily of CYP1A1, and the other fragment cloned from steller sea lion was designated CYP1A2. Degenerate PCR primers were used to amplify the fragments from liver cDNAs. The deduced amino acid sequences of these fragment CYP1As showed identities ranging from 50.0 to 94.3% with other known vertebrate CYPs in the subfamily of CYP1A, including those from fish, chicken, and terrestrial mammals. The isolated fragments were used to construct a molecular phylogeny, along with other vertebrate CYP1A cDNAs cut down in size to the corresponding region of 265 bp in which those newly determined fragments were cloned. This phylogenetic analysis by the maximum parsimony method using the PHYLIP program suggests two distinct evolutional pathways for aquatic mammalian CYP1As, compatible to a conservative taxonomy. Pinniped genes are clustered together with dog gene, forming a carnivore group, and cetaceans form another branch. Identification of CYP1A genes in marine mammals will be an introductory step to provide new insights into the metabolic or toxicological functions of CYP1As in these animals.