Loading…
Cloning and Characterization of a 4-Hydroxyphenylacetate 3-Hydroxylase From the Thermophile Geobacillus sp. PA-9
A 4-hydroxyphenylacetic acid (4-HPA) hydroxylase-encoding gene, on a 2.7-kb genomic DNA fragment, was cloned from the thermophile Geobacillus sp. PA-9. The Geobacillus sp. PA-9 4-HPA hydroxylase gene, designated hpaH, encodes a protein of 494 amino acids with a predicted molecular mass of 56.269 Da....
Saved in:
Published in: | Current microbiology 2007-12, Vol.55 (6), p.480-484 |
---|---|
Main Authors: | , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c424t-4c64c25033b01b1ff99c68cab62868e6c8b31d2171abf55f8df332d454baa4773 |
---|---|
cites | cdi_FETCH-LOGICAL-c424t-4c64c25033b01b1ff99c68cab62868e6c8b31d2171abf55f8df332d454baa4773 |
container_end_page | 484 |
container_issue | 6 |
container_start_page | 480 |
container_title | Current microbiology |
container_volume | 55 |
creator | Hawumba, J. F Brözel, V. S Theron, J |
description | A 4-hydroxyphenylacetic acid (4-HPA) hydroxylase-encoding gene, on a 2.7-kb genomic DNA fragment, was cloned from the thermophile Geobacillus sp. PA-9. The Geobacillus sp. PA-9 4-HPA hydroxylase gene, designated hpaH, encodes a protein of 494 amino acids with a predicted molecular mass of 56.269 Da. The deduced amino-acid sequence of the hpaH gene product displayed |
doi_str_mv | 10.1007/s00284-007-9016-5 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_19885237</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>19885237</sourcerecordid><originalsourceid>FETCH-LOGICAL-c424t-4c64c25033b01b1ff99c68cab62868e6c8b31d2171abf55f8df332d454baa4773</originalsourceid><addsrcrecordid>eNpdkU9r3DAQxUVpaTZpP0AvreghNyUa_bGlY1iapBBoIclZyLIUO8iWK9mQ7aePl91Q6GmG4TdvHvMQ-gL0AiitLwulTAmytkRTqIh8hzYgOCNUa3iPNpQLTlQl4QSdlvJMKbCV-4hOoFZUaqY2aNrGNPbjE7Zji7edzdbNPvd_7dynEaeALRbkdtfm9LKbOj_uonV-trPH_G0cbfH4OqcBz53HD53PQ5q6Pnp841NjXR_jUnCZLvDvK6I_oQ_BxuI_H-sZerz-8bC9JXe_bn5ur-6IE0zMRLhKOCYp5w2FBkLQ2lXK2aZiqlK-cqrh0DKowTZByqDawDlrhRSNtaKu-Rk6P-hOOf1ZfJnN0BfnY7SjT0sxoJWSjO_B7_-Bz2nJ4-rN1Hr1Agr0CsEBcjmVkn0wU-4Hm3cGqNlnYQ5ZmH27z8LIdefrUXhpBt_-2zg-fwW-HYBgk7FPuS_m8Z5R4JSuNzUV_BX7WY08</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>794241819</pqid></control><display><type>article</type><title>Cloning and Characterization of a 4-Hydroxyphenylacetate 3-Hydroxylase From the Thermophile Geobacillus sp. PA-9</title><source>Springer Nature</source><creator>Hawumba, J. F ; Brözel, V. S ; Theron, J</creator><creatorcontrib>Hawumba, J. F ; Brözel, V. S ; Theron, J</creatorcontrib><description>A 4-hydroxyphenylacetic acid (4-HPA) hydroxylase-encoding gene, on a 2.7-kb genomic DNA fragment, was cloned from the thermophile Geobacillus sp. PA-9. The Geobacillus sp. PA-9 4-HPA hydroxylase gene, designated hpaH, encodes a protein of 494 amino acids with a predicted molecular mass of 56.269 Da. The deduced amino-acid sequence of the hpaH gene product displayed <30% amino-acid sequence identity with the larger monooxygenase components of the previously characterized two-component 4-HPA 3-hydroxylases from Escherichia coli W and Klebsiella pneumoniae M5a1. A second oxidoreductase component was not present on the 2.7-kb genomic DNA fragment. The deduced amino-acid sequence of a second C-terminal truncated open reading frame, designated hpaI, exhibited homology to extradiol oxygenases and displayed the highest amino-acid sequence identity (43%) with the 3,4-dihydroxyphenylacetate 2,3-dioxygenase of Arthrobacter globiformis, encoded by mndD. These results, along with catalytic activity observed in crude intracellular extracts prepared from Escherichia coli cells expressing hpaH, is in support of a role for hpaH in the 4-HPA degradative pathway of Geobacillus sp. PA-9.</description><identifier>ISSN: 0343-8651</identifier><identifier>EISSN: 1432-0991</identifier><identifier>DOI: 10.1007/s00284-007-9016-5</identifier><identifier>PMID: 17805928</identifier><language>eng</language><publisher>United States: New York : Springer-Verlag</publisher><subject>Amino Acid Sequence ; Amino acids ; Arthrobacter globiformis ; Bacillaceae - enzymology ; Bacillaceae - genetics ; Bacillaceae - growth & development ; Bacteria ; Cloning ; Cloning, Molecular ; Deoxyribonucleic acid ; DNA ; DNA, Bacterial - analysis ; DNA, Bacterial - isolation & purification ; E coli ; Enzymes ; Escherichia coli ; Geobacillus ; Klebsiella pneumoniae ; Microbiology ; Mixed Function Oxygenases - chemistry ; Mixed Function Oxygenases - genetics ; Mixed Function Oxygenases - metabolism ; Molecular Sequence Data ; Phenylacetates - metabolism ; Sequence Alignment ; Sequence Analysis, DNA</subject><ispartof>Current microbiology, 2007-12, Vol.55 (6), p.480-484</ispartof><rights>Springer Science+Business Media, LLC 2007</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c424t-4c64c25033b01b1ff99c68cab62868e6c8b31d2171abf55f8df332d454baa4773</citedby><cites>FETCH-LOGICAL-c424t-4c64c25033b01b1ff99c68cab62868e6c8b31d2171abf55f8df332d454baa4773</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17805928$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hawumba, J. F</creatorcontrib><creatorcontrib>Brözel, V. S</creatorcontrib><creatorcontrib>Theron, J</creatorcontrib><title>Cloning and Characterization of a 4-Hydroxyphenylacetate 3-Hydroxylase From the Thermophile Geobacillus sp. PA-9</title><title>Current microbiology</title><addtitle>Curr Microbiol</addtitle><description>A 4-hydroxyphenylacetic acid (4-HPA) hydroxylase-encoding gene, on a 2.7-kb genomic DNA fragment, was cloned from the thermophile Geobacillus sp. PA-9. The Geobacillus sp. PA-9 4-HPA hydroxylase gene, designated hpaH, encodes a protein of 494 amino acids with a predicted molecular mass of 56.269 Da. The deduced amino-acid sequence of the hpaH gene product displayed <30% amino-acid sequence identity with the larger monooxygenase components of the previously characterized two-component 4-HPA 3-hydroxylases from Escherichia coli W and Klebsiella pneumoniae M5a1. A second oxidoreductase component was not present on the 2.7-kb genomic DNA fragment. The deduced amino-acid sequence of a second C-terminal truncated open reading frame, designated hpaI, exhibited homology to extradiol oxygenases and displayed the highest amino-acid sequence identity (43%) with the 3,4-dihydroxyphenylacetate 2,3-dioxygenase of Arthrobacter globiformis, encoded by mndD. These results, along with catalytic activity observed in crude intracellular extracts prepared from Escherichia coli cells expressing hpaH, is in support of a role for hpaH in the 4-HPA degradative pathway of Geobacillus sp. PA-9.</description><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Arthrobacter globiformis</subject><subject>Bacillaceae - enzymology</subject><subject>Bacillaceae - genetics</subject><subject>Bacillaceae - growth & development</subject><subject>Bacteria</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Bacterial - isolation & purification</subject><subject>E coli</subject><subject>Enzymes</subject><subject>Escherichia coli</subject><subject>Geobacillus</subject><subject>Klebsiella pneumoniae</subject><subject>Microbiology</subject><subject>Mixed Function Oxygenases - chemistry</subject><subject>Mixed Function Oxygenases - genetics</subject><subject>Mixed Function Oxygenases - metabolism</subject><subject>Molecular Sequence Data</subject><subject>Phenylacetates - metabolism</subject><subject>Sequence Alignment</subject><subject>Sequence Analysis, DNA</subject><issn>0343-8651</issn><issn>1432-0991</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNpdkU9r3DAQxUVpaTZpP0AvreghNyUa_bGlY1iapBBoIclZyLIUO8iWK9mQ7aePl91Q6GmG4TdvHvMQ-gL0AiitLwulTAmytkRTqIh8hzYgOCNUa3iPNpQLTlQl4QSdlvJMKbCV-4hOoFZUaqY2aNrGNPbjE7Zji7edzdbNPvd_7dynEaeALRbkdtfm9LKbOj_uonV-trPH_G0cbfH4OqcBz53HD53PQ5q6Pnp841NjXR_jUnCZLvDvK6I_oQ_BxuI_H-sZerz-8bC9JXe_bn5ur-6IE0zMRLhKOCYp5w2FBkLQ2lXK2aZiqlK-cqrh0DKowTZByqDawDlrhRSNtaKu-Rk6P-hOOf1ZfJnN0BfnY7SjT0sxoJWSjO_B7_-Bz2nJ4-rN1Hr1Agr0CsEBcjmVkn0wU-4Hm3cGqNlnYQ5ZmH27z8LIdefrUXhpBt_-2zg-fwW-HYBgk7FPuS_m8Z5R4JSuNzUV_BX7WY08</recordid><startdate>20071201</startdate><enddate>20071201</enddate><creator>Hawumba, J. F</creator><creator>Brözel, V. S</creator><creator>Theron, J</creator><general>New York : Springer-Verlag</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope></search><sort><creationdate>20071201</creationdate><title>Cloning and Characterization of a 4-Hydroxyphenylacetate 3-Hydroxylase From the Thermophile Geobacillus sp. PA-9</title><author>Hawumba, J. F ; Brözel, V. S ; Theron, J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c424t-4c64c25033b01b1ff99c68cab62868e6c8b31d2171abf55f8df332d454baa4773</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Arthrobacter globiformis</topic><topic>Bacillaceae - enzymology</topic><topic>Bacillaceae - genetics</topic><topic>Bacillaceae - growth & development</topic><topic>Bacteria</topic><topic>Cloning</topic><topic>Cloning, Molecular</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Bacterial - isolation & purification</topic><topic>E coli</topic><topic>Enzymes</topic><topic>Escherichia coli</topic><topic>Geobacillus</topic><topic>Klebsiella pneumoniae</topic><topic>Microbiology</topic><topic>Mixed Function Oxygenases - chemistry</topic><topic>Mixed Function Oxygenases - genetics</topic><topic>Mixed Function Oxygenases - metabolism</topic><topic>Molecular Sequence Data</topic><topic>Phenylacetates - metabolism</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hawumba, J. F</creatorcontrib><creatorcontrib>Brözel, V. S</creatorcontrib><creatorcontrib>Theron, J</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest research library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Current microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hawumba, J. F</au><au>Brözel, V. S</au><au>Theron, J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning and Characterization of a 4-Hydroxyphenylacetate 3-Hydroxylase From the Thermophile Geobacillus sp. PA-9</atitle><jtitle>Current microbiology</jtitle><addtitle>Curr Microbiol</addtitle><date>2007-12-01</date><risdate>2007</risdate><volume>55</volume><issue>6</issue><spage>480</spage><epage>484</epage><pages>480-484</pages><issn>0343-8651</issn><eissn>1432-0991</eissn><abstract>A 4-hydroxyphenylacetic acid (4-HPA) hydroxylase-encoding gene, on a 2.7-kb genomic DNA fragment, was cloned from the thermophile Geobacillus sp. PA-9. The Geobacillus sp. PA-9 4-HPA hydroxylase gene, designated hpaH, encodes a protein of 494 amino acids with a predicted molecular mass of 56.269 Da. The deduced amino-acid sequence of the hpaH gene product displayed <30% amino-acid sequence identity with the larger monooxygenase components of the previously characterized two-component 4-HPA 3-hydroxylases from Escherichia coli W and Klebsiella pneumoniae M5a1. A second oxidoreductase component was not present on the 2.7-kb genomic DNA fragment. The deduced amino-acid sequence of a second C-terminal truncated open reading frame, designated hpaI, exhibited homology to extradiol oxygenases and displayed the highest amino-acid sequence identity (43%) with the 3,4-dihydroxyphenylacetate 2,3-dioxygenase of Arthrobacter globiformis, encoded by mndD. These results, along with catalytic activity observed in crude intracellular extracts prepared from Escherichia coli cells expressing hpaH, is in support of a role for hpaH in the 4-HPA degradative pathway of Geobacillus sp. PA-9.</abstract><cop>United States</cop><pub>New York : Springer-Verlag</pub><pmid>17805928</pmid><doi>10.1007/s00284-007-9016-5</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0343-8651 |
ispartof | Current microbiology, 2007-12, Vol.55 (6), p.480-484 |
issn | 0343-8651 1432-0991 |
language | eng |
recordid | cdi_proquest_miscellaneous_19885237 |
source | Springer Nature |
subjects | Amino Acid Sequence Amino acids Arthrobacter globiformis Bacillaceae - enzymology Bacillaceae - genetics Bacillaceae - growth & development Bacteria Cloning Cloning, Molecular Deoxyribonucleic acid DNA DNA, Bacterial - analysis DNA, Bacterial - isolation & purification E coli Enzymes Escherichia coli Geobacillus Klebsiella pneumoniae Microbiology Mixed Function Oxygenases - chemistry Mixed Function Oxygenases - genetics Mixed Function Oxygenases - metabolism Molecular Sequence Data Phenylacetates - metabolism Sequence Alignment Sequence Analysis, DNA |
title | Cloning and Characterization of a 4-Hydroxyphenylacetate 3-Hydroxylase From the Thermophile Geobacillus sp. PA-9 |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-27T10%3A36%3A24IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Cloning%20and%20Characterization%20of%20a%204-Hydroxyphenylacetate%203-Hydroxylase%20From%20the%20Thermophile%20Geobacillus%20sp.%20PA-9&rft.jtitle=Current%20microbiology&rft.au=Hawumba,%20J.%20F&rft.date=2007-12-01&rft.volume=55&rft.issue=6&rft.spage=480&rft.epage=484&rft.pages=480-484&rft.issn=0343-8651&rft.eissn=1432-0991&rft_id=info:doi/10.1007/s00284-007-9016-5&rft_dat=%3Cproquest_cross%3E19885237%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c424t-4c64c25033b01b1ff99c68cab62868e6c8b31d2171abf55f8df332d454baa4773%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=794241819&rft_id=info:pmid/17805928&rfr_iscdi=true |