Variations in spatial and temporal distribution of Archaea in the North Sea in relation to environmental variables

Abstract The spatial and temporal distribution of pelagic Archaea was studied in the southern North Sea by rRNA hybridization, sequencing and quantification of 16S rRNA gene and membrane lipid analyses and related to physical, chemical and biological parameters to determine the factors influencing a...

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Bibliographic Details
Published in:FEMS microbiology ecology 2007-12, Vol.62 (3), p.242-257
Main Authors: Herfort, Lydie, Schouten, Stefan, Abbas, Ben, Veldhuis, Marcel J. W., Coolen, Marco J. L., Wuchter, Cornelia, Boon, Jan P., Herndl, Gerhard J., Sinninghe Damsté, Jaap S.
Format: Article
Language:English
Subjects:
Abundance
Algae
Ammonia
Ammonia monooxygenase
analysis
Archaea
Bacteriology
Biogeography
Biological and medical sciences
biomass
chemistry
Chlorophyll
classification
Communities
Community structure
Copy number
correlation
Crenarchaeota
Crenarchaeota - chemistry
Crenarchaeota - classification
Crenarchaeota - genetics
Crenarchaeota - isolation & purification
distribution
Distribution patterns
DNA, Archaeal
DNA, Archaeal - analysis
Ecological niches
Ecology
Ecosystem
environmental factors
Euryarchaeota
Euryarchaeota - chemistry
Euryarchaeota - classification
Euryarchaeota - genetics
Euryarchaeota - isolation & purification
Fundamental and applied biological sciences. Psychology
gene dosage
Gene sequencing
genes
Genes, rRNA
genetics
Hybridization
isolation & purification
Lipids
Marine
Membrane Lipids
Membrane Lipids - analysis
metabolism
Microbiology
Miscellaneous
Molecular Sequence Data
Niches
nitrates
nitrification
nitrites
Nitrites - metabolism
North Sea
Nucleic Acid Hybridization
Nutrient concentrations
nutrient content
Organic chemistry
Oxidoreductases
Oxidoreductases - genetics
Oxidoreductases - metabolism
Phosphorus
Phototrophy
Phylogeny
Phytoplankton
Plankton
ribosomal RNA
RNA, Ribosomal, 16S
RNA, Ribosomal, 16S - genetics
rRNA 16S
Seasonal distribution
Seasons
Seawater
Seawater - chemistry
Seawater - microbiology
Sequence Analysis, DNA
spring
summer
Temporal distribution
temporal variation
winter
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