Photoactivatable CRISPR/Cas12a Strategy for One-Pot DETECTR Molecular Diagnosis

• Published in: Analytical chemistry (Washington) 2022-07, Vol.94 (27), p.9724-9731
• Main Authors: Chen, Yong, Xu, Xiaoling, Wang, Jiachun, Zhang, Yibin, Zeng, Wentao, Liu, Yizhen, Zhang, Xueji
• Format: Article
• Language: English
• Subjects: Air pollution; Amplification; Analytical chemistry; Chemistry; Contamination; CRISPR; Nucleic acids; Recombinase; Sensitivity enhancement; Strategy; Ultraviolet radiation
• ISSN: 0003-2700; 1520-6882
• DOI: 10.1021/acs.analchem.2c01193

As a golden partner of recombinase polymerase amplification (RPA), CRISPR/Cas12a has been proven to solve the false-positive problem caused by nonspecific amplification perfectly; meanwhile, its trans-cleave activity has further enhanced the sensitivity. However, the solution transfer operation after tube cap opening greatly increases the risk of aerosol contamination of amplicon, which is inconsistent with point-of-care (POC) diagnostics requirements. This study proposes a photoactivated CRISPR/Cas12a strategy to achieve one-pot high-sensitivity nucleic acid detection. Using photocleavable complementary ssDNA to block crRNA, RPA amplification can smoothly pass through the exponential interval without being affected by activated Cas12a in the critical early stage. After enough amplicons were produced, the Cas12a test was activated by short bursts of ultraviolet radiation at 365 nm. This one-pot method achieved a sensitivity of 2.5 copies within 40 min. This simple and sensitive one-pot method can effectively avoid amplicon contamination and lower the threshold for molecular diagnostics in POC.