SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae genome

SPrCY is a web-accessible database which provides comparison of structure prediction results for the Saccharomyces cerevisiae genome. This web service offers the ability to search, analyze and compare the yeast structural predictions from sequence-only (Superfamily, PDBAA BLAST and Pfam) and sequenc...

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Published in:Bioinformatics 2004-09, Vol.20 (14), p.2312-2314
Main Authors: Dolinsky, T. J., Burgers, P. M. J., Karplus, K., Baker, N. A.
Format: Article
Language:English
Subjects:
Algorithms
Biological and medical sciences
Chromosome Mapping - methods
Databases, Genetic
Fundamental and applied biological sciences. Psychology
General aspects
Information Storage and Retrieval - methods
Internet
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Models, Molecular
Protein Conformation
Saccharomyces cerevisiae
Saccharomyces cerevisiae - genetics
Saccharomyces cerevisiae - metabolism
Saccharomyces cerevisiae Proteins - chemistry
Saccharomyces cerevisiae Proteins - genetics
Sequence Alignment - methods
Sequence Analysis, Protein - methods
Structure-Activity Relationship
User-Computer Interface
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container_end_page 2314
container_issue 14
container_start_page 2312
container_title Bioinformatics
container_volume 20
creator Dolinsky, T. J.
Burgers, P. M. J.
Karplus, K.
Baker, N. A.
description SPrCY is a web-accessible database which provides comparison of structure prediction results for the Saccharomyces cerevisiae genome. This web service offers the ability to search, analyze and compare the yeast structural predictions from sequence-only (Superfamily, PDBAA BLAST and Pfam) and sequence-structure-based (SAM-T02, 3D-PSSM, mGenTHREADER) methods. Availability: The service is freely available via web at http://agave.wustl.edu/yeast/
doi_str_mv 10.1093/bioinformatics/bth223
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source Oxford Journals Open Access Collection
subjects Algorithms
Biological and medical sciences
Chromosome Mapping - methods
Databases, Genetic
Fundamental and applied biological sciences. Psychology
General aspects
Information Storage and Retrieval - methods
Internet
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Models, Molecular
Protein Conformation
Saccharomyces cerevisiae
Saccharomyces cerevisiae - genetics
Saccharomyces cerevisiae - metabolism
Saccharomyces cerevisiae Proteins - chemistry
Saccharomyces cerevisiae Proteins - genetics
Sequence Alignment - methods
Sequence Analysis, Protein - methods
Structure-Activity Relationship
User-Computer Interface
title SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae genome
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