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Isolation and characterization of a polymorphic stigma-specific class III peroxidase gene from Senecio squalidus L. (Asteraceae)
A novel stigma-specific class III peroxidase gene, SSP (Stigma-Specific Peroxidase), has been isolated from the self-incompatible daisy Senecio squalidus L. (Asteraceae). Expression of SSP in flower buds is developmentally regulated, with maximal levels of expression coinciding with anthesis, when s...
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Published in: | Plant molecular biology 2005-03, Vol.57 (5), p.659-677 |
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description | A novel stigma-specific class III peroxidase gene, SSP (Stigma-Specific Peroxidase), has been isolated from the self-incompatible daisy Senecio squalidus L. (Asteraceae). Expression of SSP in flower buds is developmentally regulated, with maximal levels of expression coinciding with anthesis, when stigmas are most receptive to pollen and when self-incompatibility is fully developed. In situ hybridization revealed SSP expression to be localized exclusively to the specialized secretory epidermal cells (papillae) of the stigma, which receive and discriminate pollen. SSP is therefore the first tissue-specific and cell-specific peroxidase gene identified in a plant. SSP belongs to a distinct clade of class III plant peroxidases that possess two introns, instead of the more normal situation of three conserved introns. The deduced amino acid sequence of SSP revealed a 27 amino acid signal peptide, suggesting that the SSP protein is secreted to the cell wall of the stigmatic papillae. In-gel peroxidase activity assays showed that SSP has relatively low peroxidase activity compared to other, as yet uncharacterized, peroxidases present in stigmatic extracts. Six SSP alleles have been cloned from different lines of S. squalidus carrying a range of self-incompatibility (S)-alleles but there was no consistent association between the presence of a particular SSP allele and S-genotype indicating that SSP is not the female determinant of SSI in S. squalidus. Nevertheless, the precise expression of SSP in stigmatic papillae suggests that it may have a more general function in pollen-stigma interactions, or alternatively in protection of stigmas from pathogen attack. Extensive database screens have identified homologues of SSP in other plant species, but available expression data for these genes indicates that none are flower-specific, suggesting that SSP represents a new functional type of class III peroxidase specific to the stigma. We discuss the possible function(s) of S. squalidus SSP in pollen-stigma interactions and in protection of stigmas from pathogen attack. |
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(Asteraceae)</title><source>Springer Nature</source><creator>McInnis, S.M ; Costa, L.M ; Gutierrez-Marcos, J.F ; Henderson, C.A ; Hiscock, S.J</creator><creatorcontrib>McInnis, S.M ; Costa, L.M ; Gutierrez-Marcos, J.F ; Henderson, C.A ; Hiscock, S.J</creatorcontrib><description>A novel stigma-specific class III peroxidase gene, SSP (Stigma-Specific Peroxidase), has been isolated from the self-incompatible daisy Senecio squalidus L. (Asteraceae). Expression of SSP in flower buds is developmentally regulated, with maximal levels of expression coinciding with anthesis, when stigmas are most receptive to pollen and when self-incompatibility is fully developed. In situ hybridization revealed SSP expression to be localized exclusively to the specialized secretory epidermal cells (papillae) of the stigma, which receive and discriminate pollen. SSP is therefore the first tissue-specific and cell-specific peroxidase gene identified in a plant. SSP belongs to a distinct clade of class III plant peroxidases that possess two introns, instead of the more normal situation of three conserved introns. The deduced amino acid sequence of SSP revealed a 27 amino acid signal peptide, suggesting that the SSP protein is secreted to the cell wall of the stigmatic papillae. In-gel peroxidase activity assays showed that SSP has relatively low peroxidase activity compared to other, as yet uncharacterized, peroxidases present in stigmatic extracts. Six SSP alleles have been cloned from different lines of S. squalidus carrying a range of self-incompatibility (S)-alleles but there was no consistent association between the presence of a particular SSP allele and S-genotype indicating that SSP is not the female determinant of SSI in S. squalidus. Nevertheless, the precise expression of SSP in stigmatic papillae suggests that it may have a more general function in pollen-stigma interactions, or alternatively in protection of stigmas from pathogen attack. Extensive database screens have identified homologues of SSP in other plant species, but available expression data for these genes indicates that none are flower-specific, suggesting that SSP represents a new functional type of class III peroxidase specific to the stigma. We discuss the possible function(s) of S. squalidus SSP in pollen-stigma interactions and in protection of stigmas from pathogen attack.</description><identifier>ISSN: 0167-4412</identifier><identifier>EISSN: 1573-5028</identifier><identifier>DOI: 10.1007/s11103-005-1426-9</identifier><identifier>PMID: 15988562</identifier><language>eng</language><publisher>Netherlands: Springer Nature B.V</publisher><subject>Alleles ; Amino Acid Sequence ; amino acid sequences ; Amino acids ; Asteraceae ; Base Sequence ; Blotting, Northern ; Blotting, Southern ; cell walls ; Cloning, Molecular ; complementary DNA ; DNA, Complementary - chemistry ; DNA, Complementary - genetics ; DNA, Complementary - isolation & purification ; DNA, Plant - chemistry ; DNA, Plant - isolation & purification ; enzyme activity ; Enzymes ; exons ; Fertility - genetics ; Flowers ; Flowers - enzymology ; gene expression ; Gene Expression Regulation, Enzymologic ; Gene Expression Regulation, Plant ; genes ; Genotype ; In Situ Hybridization ; introns ; Isoelectric Focusing ; Isoenzymes - chemistry ; Isoenzymes - genetics ; Isoenzymes - metabolism ; messenger RNA ; Molecular Sequence Data ; nucleotide sequences ; Pathogens ; peroxidase ; Peroxidase - chemistry ; Peroxidase - genetics ; Peroxidase - metabolism ; Phylogeny ; Plant species ; Pollen ; Polymorphism, Genetic ; protein transport ; Proteins ; RNA, Plant - genetics ; RNA, Plant - metabolism ; Senecio - enzymology ; Senecio - genetics ; Senecio squalidus ; Sequence Analysis, DNA ; Sequence Analysis, Protein ; Sequence Homology, Amino Acid ; signal peptide ; SSWP gene ; stigma</subject><ispartof>Plant molecular biology, 2005-03, Vol.57 (5), p.659-677</ispartof><rights>Springer 2005</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c381t-8688ec3a15e2c45cb854f74c2c6300a12a7253b678f936785fba7a97c380846a3</citedby><cites>FETCH-LOGICAL-c381t-8688ec3a15e2c45cb854f74c2c6300a12a7253b678f936785fba7a97c380846a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15988562$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>McInnis, S.M</creatorcontrib><creatorcontrib>Costa, L.M</creatorcontrib><creatorcontrib>Gutierrez-Marcos, J.F</creatorcontrib><creatorcontrib>Henderson, C.A</creatorcontrib><creatorcontrib>Hiscock, S.J</creatorcontrib><title>Isolation and characterization of a polymorphic stigma-specific class III peroxidase gene from Senecio squalidus L. (Asteraceae)</title><title>Plant molecular biology</title><addtitle>Plant Mol Biol</addtitle><description>A novel stigma-specific class III peroxidase gene, SSP (Stigma-Specific Peroxidase), has been isolated from the self-incompatible daisy Senecio squalidus L. (Asteraceae). Expression of SSP in flower buds is developmentally regulated, with maximal levels of expression coinciding with anthesis, when stigmas are most receptive to pollen and when self-incompatibility is fully developed. In situ hybridization revealed SSP expression to be localized exclusively to the specialized secretory epidermal cells (papillae) of the stigma, which receive and discriminate pollen. SSP is therefore the first tissue-specific and cell-specific peroxidase gene identified in a plant. SSP belongs to a distinct clade of class III plant peroxidases that possess two introns, instead of the more normal situation of three conserved introns. The deduced amino acid sequence of SSP revealed a 27 amino acid signal peptide, suggesting that the SSP protein is secreted to the cell wall of the stigmatic papillae. In-gel peroxidase activity assays showed that SSP has relatively low peroxidase activity compared to other, as yet uncharacterized, peroxidases present in stigmatic extracts. Six SSP alleles have been cloned from different lines of S. squalidus carrying a range of self-incompatibility (S)-alleles but there was no consistent association between the presence of a particular SSP allele and S-genotype indicating that SSP is not the female determinant of SSI in S. squalidus. Nevertheless, the precise expression of SSP in stigmatic papillae suggests that it may have a more general function in pollen-stigma interactions, or alternatively in protection of stigmas from pathogen attack. Extensive database screens have identified homologues of SSP in other plant species, but available expression data for these genes indicates that none are flower-specific, suggesting that SSP represents a new functional type of class III peroxidase specific to the stigma. We discuss the possible function(s) of S. squalidus SSP in pollen-stigma interactions and in protection of stigmas from pathogen attack.</description><subject>Alleles</subject><subject>Amino Acid Sequence</subject><subject>amino acid sequences</subject><subject>Amino acids</subject><subject>Asteraceae</subject><subject>Base Sequence</subject><subject>Blotting, Northern</subject><subject>Blotting, Southern</subject><subject>cell walls</subject><subject>Cloning, Molecular</subject><subject>complementary DNA</subject><subject>DNA, Complementary - chemistry</subject><subject>DNA, Complementary - genetics</subject><subject>DNA, Complementary - isolation & purification</subject><subject>DNA, Plant - chemistry</subject><subject>DNA, Plant - isolation & purification</subject><subject>enzyme activity</subject><subject>Enzymes</subject><subject>exons</subject><subject>Fertility - genetics</subject><subject>Flowers</subject><subject>Flowers - enzymology</subject><subject>gene expression</subject><subject>Gene Expression Regulation, Enzymologic</subject><subject>Gene Expression Regulation, Plant</subject><subject>genes</subject><subject>Genotype</subject><subject>In Situ Hybridization</subject><subject>introns</subject><subject>Isoelectric Focusing</subject><subject>Isoenzymes - chemistry</subject><subject>Isoenzymes - genetics</subject><subject>Isoenzymes - metabolism</subject><subject>messenger RNA</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>Pathogens</subject><subject>peroxidase</subject><subject>Peroxidase - chemistry</subject><subject>Peroxidase - genetics</subject><subject>Peroxidase - metabolism</subject><subject>Phylogeny</subject><subject>Plant species</subject><subject>Pollen</subject><subject>Polymorphism, Genetic</subject><subject>protein transport</subject><subject>Proteins</subject><subject>RNA, Plant - genetics</subject><subject>RNA, Plant - metabolism</subject><subject>Senecio - enzymology</subject><subject>Senecio - genetics</subject><subject>Senecio squalidus</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Analysis, Protein</subject><subject>Sequence Homology, Amino Acid</subject><subject>signal peptide</subject><subject>SSWP gene</subject><subject>stigma</subject><issn>0167-4412</issn><issn>1573-5028</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><recordid>eNqFkctu1DAYhS0EotPCA7ABi0UFixT_8TXLquISaSQWpWvrH48zdZXEqZ1IlBWPjkcZCYkNG1-_cyzrI-QNsCtgTH_KAMB4xZisQNSqap6RDUjNK8lq85xsGChdCQH1GTnP-YGxkuLqJTkD2RgjVb0hv9sce5xDHCmOe-ruMaGbfQq_1sPYUaRT7J-GmKb74Giew2HAKk_eha7sXY8507Zt6eRT_Bn2mD09-NHTLsWB3paVC5HmxwX7sF8y3V7RD9e5PIHOo__4irzosM_-9Wm-IHdfPv-4-VZtv39tb663leMG5sooY7zjCNLXTki3M1J0WrjaKc4YQo26lnyntOkaXkbZ7VBjo0uaGaGQX5DLtXdK8XHxebZDyM73PY4-Ltkq3RjdNPBfEDQIw1VTwPf_gA9xSWP5hNVKCS0liALBCrkUc06-s1MKA6YnC8weJdpVoi0S7VGiPRa_PRUvu8Hv_yZO1grwbgU6jBYPKWR7d1sz4EVwuReM_wFOTaBR</recordid><startdate>20050301</startdate><enddate>20050301</enddate><creator>McInnis, S.M</creator><creator>Costa, L.M</creator><creator>Gutierrez-Marcos, J.F</creator><creator>Henderson, C.A</creator><creator>Hiscock, S.J</creator><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20050301</creationdate><title>Isolation and characterization of a polymorphic stigma-specific class III peroxidase gene from Senecio squalidus L. (Asteraceae)</title><author>McInnis, S.M ; Costa, L.M ; Gutierrez-Marcos, J.F ; Henderson, C.A ; Hiscock, S.J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c381t-8688ec3a15e2c45cb854f74c2c6300a12a7253b678f936785fba7a97c380846a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Alleles</topic><topic>Amino Acid Sequence</topic><topic>amino acid sequences</topic><topic>Amino acids</topic><topic>Asteraceae</topic><topic>Base Sequence</topic><topic>Blotting, Northern</topic><topic>Blotting, Southern</topic><topic>cell walls</topic><topic>Cloning, Molecular</topic><topic>complementary DNA</topic><topic>DNA, Complementary - chemistry</topic><topic>DNA, Complementary - genetics</topic><topic>DNA, Complementary - isolation & purification</topic><topic>DNA, Plant - chemistry</topic><topic>DNA, Plant - isolation & purification</topic><topic>enzyme activity</topic><topic>Enzymes</topic><topic>exons</topic><topic>Fertility - genetics</topic><topic>Flowers</topic><topic>Flowers - enzymology</topic><topic>gene expression</topic><topic>Gene Expression Regulation, Enzymologic</topic><topic>Gene Expression Regulation, Plant</topic><topic>genes</topic><topic>Genotype</topic><topic>In Situ Hybridization</topic><topic>introns</topic><topic>Isoelectric Focusing</topic><topic>Isoenzymes - chemistry</topic><topic>Isoenzymes - genetics</topic><topic>Isoenzymes - metabolism</topic><topic>messenger RNA</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequences</topic><topic>Pathogens</topic><topic>peroxidase</topic><topic>Peroxidase - chemistry</topic><topic>Peroxidase - genetics</topic><topic>Peroxidase - metabolism</topic><topic>Phylogeny</topic><topic>Plant species</topic><topic>Pollen</topic><topic>Polymorphism, Genetic</topic><topic>protein transport</topic><topic>Proteins</topic><topic>RNA, Plant - genetics</topic><topic>RNA, Plant - metabolism</topic><topic>Senecio - enzymology</topic><topic>Senecio - genetics</topic><topic>Senecio squalidus</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Analysis, Protein</topic><topic>Sequence Homology, Amino Acid</topic><topic>signal peptide</topic><topic>SSWP gene</topic><topic>stigma</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>McInnis, S.M</creatorcontrib><creatorcontrib>Costa, L.M</creatorcontrib><creatorcontrib>Gutierrez-Marcos, J.F</creatorcontrib><creatorcontrib>Henderson, C.A</creatorcontrib><creatorcontrib>Hiscock, S.J</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest research library</collection><collection>ProQuest Biological Science Journals</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Plant molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>McInnis, S.M</au><au>Costa, L.M</au><au>Gutierrez-Marcos, J.F</au><au>Henderson, C.A</au><au>Hiscock, S.J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Isolation and characterization of a polymorphic stigma-specific class III peroxidase gene from Senecio squalidus L. (Asteraceae)</atitle><jtitle>Plant molecular biology</jtitle><addtitle>Plant Mol Biol</addtitle><date>2005-03-01</date><risdate>2005</risdate><volume>57</volume><issue>5</issue><spage>659</spage><epage>677</epage><pages>659-677</pages><issn>0167-4412</issn><eissn>1573-5028</eissn><abstract>A novel stigma-specific class III peroxidase gene, SSP (Stigma-Specific Peroxidase), has been isolated from the self-incompatible daisy Senecio squalidus L. (Asteraceae). Expression of SSP in flower buds is developmentally regulated, with maximal levels of expression coinciding with anthesis, when stigmas are most receptive to pollen and when self-incompatibility is fully developed. In situ hybridization revealed SSP expression to be localized exclusively to the specialized secretory epidermal cells (papillae) of the stigma, which receive and discriminate pollen. SSP is therefore the first tissue-specific and cell-specific peroxidase gene identified in a plant. SSP belongs to a distinct clade of class III plant peroxidases that possess two introns, instead of the more normal situation of three conserved introns. The deduced amino acid sequence of SSP revealed a 27 amino acid signal peptide, suggesting that the SSP protein is secreted to the cell wall of the stigmatic papillae. In-gel peroxidase activity assays showed that SSP has relatively low peroxidase activity compared to other, as yet uncharacterized, peroxidases present in stigmatic extracts. Six SSP alleles have been cloned from different lines of S. squalidus carrying a range of self-incompatibility (S)-alleles but there was no consistent association between the presence of a particular SSP allele and S-genotype indicating that SSP is not the female determinant of SSI in S. squalidus. Nevertheless, the precise expression of SSP in stigmatic papillae suggests that it may have a more general function in pollen-stigma interactions, or alternatively in protection of stigmas from pathogen attack. Extensive database screens have identified homologues of SSP in other plant species, but available expression data for these genes indicates that none are flower-specific, suggesting that SSP represents a new functional type of class III peroxidase specific to the stigma. We discuss the possible function(s) of S. squalidus SSP in pollen-stigma interactions and in protection of stigmas from pathogen attack.</abstract><cop>Netherlands</cop><pub>Springer Nature B.V</pub><pmid>15988562</pmid><doi>10.1007/s11103-005-1426-9</doi><tpages>19</tpages></addata></record> |
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subjects | Alleles Amino Acid Sequence amino acid sequences Amino acids Asteraceae Base Sequence Blotting, Northern Blotting, Southern cell walls Cloning, Molecular complementary DNA DNA, Complementary - chemistry DNA, Complementary - genetics DNA, Complementary - isolation & purification DNA, Plant - chemistry DNA, Plant - isolation & purification enzyme activity Enzymes exons Fertility - genetics Flowers Flowers - enzymology gene expression Gene Expression Regulation, Enzymologic Gene Expression Regulation, Plant genes Genotype In Situ Hybridization introns Isoelectric Focusing Isoenzymes - chemistry Isoenzymes - genetics Isoenzymes - metabolism messenger RNA Molecular Sequence Data nucleotide sequences Pathogens peroxidase Peroxidase - chemistry Peroxidase - genetics Peroxidase - metabolism Phylogeny Plant species Pollen Polymorphism, Genetic protein transport Proteins RNA, Plant - genetics RNA, Plant - metabolism Senecio - enzymology Senecio - genetics Senecio squalidus Sequence Analysis, DNA Sequence Analysis, Protein Sequence Homology, Amino Acid signal peptide SSWP gene stigma |
title | Isolation and characterization of a polymorphic stigma-specific class III peroxidase gene from Senecio squalidus L. (Asteraceae) |
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