Evaluation of polymerase chain reaction and dot blot hybridisation tests in the diagnosis of pigeon circovirus infections

• Published in: Veterinary microbiology 2002-10, Vol.89 (1), p.1-16
• Main Authors: Todd, D, Duchatel, J.P, Weston, J.H, Ball, N.W, Borghmans, B.J, Moffett, D.A, Smyth, J.A
• Format: Article
• Language: English
• Subjects: Animals; Bacterial diseases; Base Sequence; Belgium; Biological and medical sciences; Bird Diseases - diagnosis; Bird Diseases - pathology; Bird Diseases - virology; Blotting, Southern - veterinary; Bursa of Fabricius - pathology; Bursa of Fabricius - virology; Circoviridae Infections - diagnosis; Circoviridae Infections - pathology; Circoviridae Infections - veterinary; Circoviridae Infections - virology; Circovirus - genetics; Circovirus - isolation & purification; Columbidae; Diagnosis-viruses; DNA, Viral - chemistry; DNA, Viral - genetics; Experimental bacterial diseases and models; Fundamental and applied biological sciences. Psychology; Fundamental immunology; Histocytochemistry - veterinary; Infectious diseases; Medical sciences; Molecular immunology; Molecular Sequence Data; Northern Ireland; Nucleic Acid Hybridization - methods; PCR; Pigeon circovirus; Polymerase Chain Reaction - methods; Polymerase Chain Reaction - veterinary; Sensitivity and Specificity; Sequence Alignment; Sequence Analysis, DNA; Techniques
• ISSN: 0378-1135; 1873-2542
• DOI: 10.1016/S0378-1135(02)00154-2

Polymerase chain reaction (PCR) and dot blot hybridisation (DBH) tests for detecting pigeon circovirus (PiCV) DNA were developed and evaluated using tissue samples obtained from diseased and clinically normal pigeons, which originated in Belgium and Northern Ireland. When PCR product was visually detected, the limit of detection of the PCR test was 31 fg, while that of the DBH was 1.6 pg. For evaluation purposes, the results of the PCR and DBH tests, performed with DNAs extracted from samples of bursa of Fabricius (BF), were compared with those of in situ hybridisation (ISH) and histology. In 32 samples tested by all four tests, 27 (84%) were positive by PCR, 24 (75%) were positive by ISH, 20 (63%) were positive by DBH, and 13 (41%) were positive by histology. Additional PCR testing showed that in some disease-affected birds, PiCV DNA could be detected in a range of tissues including thymus, spleen, liver, kidney and brain. The PCR detection of PiCV DNA in BF samples from clinically normal birds indicated that PCR can detect infections in the absence of disease, a finding that mitigates against its use as a disease diagnostic. In addition, nucleotide sequence determinations indicated that PCR test performance was adversely affected by the sequence diversity exhibited by selected PiCVs. The application of the DBH test to dilutions of test samples indicated that the BF from some diseased pigeons contained very large amounts of virus DNA, as much as 10 13 genome copies/g tissue, and suggested that this test may be a convenient method of providing a semi-quantitative estimate of virus load.