Structural Insights into the Binding of Uranyl with Human Serum Protein Apotransferrin Structure and Spectra of Protein−Uranyl Interactions

• Published in: Chemical research in toxicology 2009-09, Vol.22 (9), p.1613-1621
• Main Authors: Benavides-Garcia, Maria G, Balasubramanian, Krishnan
• Format: Article
• Language: English
• Subjects: Apoproteins - chemistry; Apoproteins - metabolism; Binding Sites; Blood-Brain Barrier - metabolism; Humans; Hydrogen Bonding; Protein Binding; Protein Structure, Tertiary; Spectrophotometry, Infrared; Transferrin - chemistry; Transferrin - metabolism; Uranium - chemistry
• ISSN: 0893-228X; 1520-5010
• DOI: 10.1021/tx900184r

Ab initio quantum mechanical computational studies for the structure and IR spectra of the uranyl complex with human serum apotransferrin (TF) protein are carried out to model uranyl intake into the human cell through endocytosis and formation of a coordination complex with the protein binding sites. The computed IR spectra and structure of the uranyl−protein complex facilitate interpretation of the observed spectra and confirm the primary binding sites of the transferrin protein with the uranyl ion. Our computed equilibrium geometry and the IR spectra of the uranyl−TF complex reveal that uranyl ion is bound to two tyrosines, one aspartate group, and one carbonate ion. Our IR spectra indicate that histidine is not involved in binding to uranyl with transferrin protein. Our computations reveal a short, strong hydrogen bond, which could play an important role in the stabilization and formation of the uranyl−TF complex. Computed Laplacian charge plots indicate high chemical reactivity on this complex as both an electrophile and a nucleophile, facilitating binding to different receptors and thus entry into a number of target organs and the blood−brain barrier. The Mulliken charge density plots and the three-dimensional charge density plots suggest a donor−acceptor mechanism in the complex formation.