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Ikirara, a novel transposon family from the malaria vector mosquito, Anopheles gambiae
Members of a novel transposon family, Ikirara, were found in the genome of the malaria vector Anopheles gambiae. They are most abundant in A. gambiae sensu stricto, but related sequences were found in all four other tested members of this species complex. No relatives were found in A. funestus or A....
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Published in: | Insect molecular biology 1998-02, Vol.7 (1), p.1-10 |
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creator | Romans, P Bhattacharyya, R.K Colavita, A |
description | Members of a novel transposon family, Ikirara, were found in the genome of the malaria vector Anopheles gambiae. They are most abundant in A. gambiae sensu stricto, but related sequences were found in all four other tested members of this species complex. No relatives were found in A. funestus or A. stephensi. Ikirara1, the first isolated family member, was found between two of the tandem Vitellogenin (Vg) genes. Because it was found at this location in G3 and only one of nine other A. gambiae s.s. strains examined, and because its 216 bp inverted terminal repeats are 100% identical, transposition to this locus may have been recent. Ikirara1 inverted repeat terminal sequences are similar to those of DNA to DNA transposons of the mariner/Tc1 and hAT superfamilies. Also similar to mariner/Tc1 elements, insertion of Ikirara1 apparently created a duplication of the dinucleotide TA at the target site. |
doi_str_mv | 10.1046/j.1365-2583.1998.71046.x |
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Also similar to mariner/Tc1 elements, insertion of Ikirara1 apparently created a duplication of the dinucleotide TA at the target site.</description><identifier>ISSN: 0962-1075</identifier><identifier>EISSN: 1365-2583</identifier><identifier>DOI: 10.1046/j.1365-2583.1998.71046.x</identifier><identifier>PMID: 9459424</identifier><language>eng</language><publisher>Oxford BSL: Blackwell Science Ltd</publisher><subject>Animals ; Anopheles - genetics ; Anopheles gambiae ; Base Sequence ; chromosome mapping ; copy number ; DNA ; DNA Transposable Elements ; genbank/u55049 ; gene location ; Genes, Insect ; genomics ; Insect Proteins - genetics ; Insect Vectors - genetics ; inverted repeats ; Malaria - transmission ; Molecular Sequence Data ; nucleic acid hybridization ; nucleotide sequences ; repetitive sequences ; transposons</subject><ispartof>Insect molecular biology, 1998-02, Vol.7 (1), p.1-10</ispartof><rights>1997 Blackwell Science Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4246-daff26c4453882f767a1c31c1d458e98596514111f80b580625ead97f1acab23</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9459424$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Romans, P</creatorcontrib><creatorcontrib>Bhattacharyya, R.K</creatorcontrib><creatorcontrib>Colavita, A</creatorcontrib><title>Ikirara, a novel transposon family from the malaria vector mosquito, Anopheles gambiae</title><title>Insect molecular biology</title><addtitle>Insect Mol Biol</addtitle><description>Members of a novel transposon family, Ikirara, were found in the genome of the malaria vector Anopheles gambiae. They are most abundant in A. gambiae sensu stricto, but related sequences were found in all four other tested members of this species complex. No relatives were found in A. funestus or A. stephensi. Ikirara1, the first isolated family member, was found between two of the tandem Vitellogenin (Vg) genes. Because it was found at this location in G3 and only one of nine other A. gambiae s.s. strains examined, and because its 216 bp inverted terminal repeats are 100% identical, transposition to this locus may have been recent. Ikirara1 inverted repeat terminal sequences are similar to those of DNA to DNA transposons of the mariner/Tc1 and hAT superfamilies. Also similar to mariner/Tc1 elements, insertion of Ikirara1 apparently created a duplication of the dinucleotide TA at the target site.</description><subject>Animals</subject><subject>Anopheles - genetics</subject><subject>Anopheles gambiae</subject><subject>Base Sequence</subject><subject>chromosome mapping</subject><subject>copy number</subject><subject>DNA</subject><subject>DNA Transposable Elements</subject><subject>genbank/u55049</subject><subject>gene location</subject><subject>Genes, Insect</subject><subject>genomics</subject><subject>Insect Proteins - genetics</subject><subject>Insect Vectors - genetics</subject><subject>inverted repeats</subject><subject>Malaria - transmission</subject><subject>Molecular Sequence Data</subject><subject>nucleic acid hybridization</subject><subject>nucleotide sequences</subject><subject>repetitive sequences</subject><subject>transposons</subject><issn>0962-1075</issn><issn>1365-2583</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><recordid>eNqNkE1vEzEQhi1EVULhJyB84tTd2t71lzg1hbZRAxwIcLQmG7t1urtO7U1J_j27bJRzTyPN-z4z0oMQpiSnpBQX65wWgmeMqyKnWqtcDut89wpNjsFrNCFasIwSyd-gtymtCSFKC32KTnXJdcnKCfo9e_QRIpxjwG14tjXuIrRpE1JosYPG13vsYmhw92BxAzVED_jZVl2IuAnpaeu7cI4v27B5sLVN-B6apQf7Dp04qJN9f5hnaHH9dXF1m81_3MyuLudZ1X8X2QqcY6IqS14oxZwUEmhV0IquSq6sVlwLTktKqVNkyRURjFtYaekoVLBkxRn6NJ7dxPC0takzjU-VrWtobdgmI7WQnBayL6qxWMWQUrTObKJvIO4NJWZQZ9ZmEGcGcWYwav4bNbse_XD4sV02dnUEDwr7_POY__W13b_4rpl9m5aip7OR9qmzuyMN8dEIWUhu_ny_MVN6dztfXE_Nl77_cew7CAbuo0_m109GaEGYUr0eVvwD_cGcYw</recordid><startdate>199802</startdate><enddate>199802</enddate><creator>Romans, P</creator><creator>Bhattacharyya, R.K</creator><creator>Colavita, A</creator><general>Blackwell Science Ltd</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>199802</creationdate><title>Ikirara, a novel transposon family from the malaria vector mosquito, Anopheles gambiae</title><author>Romans, P ; Bhattacharyya, R.K ; Colavita, A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4246-daff26c4453882f767a1c31c1d458e98596514111f80b580625ead97f1acab23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>Animals</topic><topic>Anopheles - genetics</topic><topic>Anopheles gambiae</topic><topic>Base Sequence</topic><topic>chromosome mapping</topic><topic>copy number</topic><topic>DNA</topic><topic>DNA Transposable Elements</topic><topic>genbank/u55049</topic><topic>gene location</topic><topic>Genes, Insect</topic><topic>genomics</topic><topic>Insect Proteins - genetics</topic><topic>Insect Vectors - genetics</topic><topic>inverted repeats</topic><topic>Malaria - transmission</topic><topic>Molecular Sequence Data</topic><topic>nucleic acid hybridization</topic><topic>nucleotide sequences</topic><topic>repetitive sequences</topic><topic>transposons</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Romans, P</creatorcontrib><creatorcontrib>Bhattacharyya, R.K</creatorcontrib><creatorcontrib>Colavita, A</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Insect molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Romans, P</au><au>Bhattacharyya, R.K</au><au>Colavita, A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Ikirara, a novel transposon family from the malaria vector mosquito, Anopheles gambiae</atitle><jtitle>Insect molecular biology</jtitle><addtitle>Insect Mol Biol</addtitle><date>1998-02</date><risdate>1998</risdate><volume>7</volume><issue>1</issue><spage>1</spage><epage>10</epage><pages>1-10</pages><issn>0962-1075</issn><eissn>1365-2583</eissn><abstract>Members of a novel transposon family, Ikirara, were found in the genome of the malaria vector Anopheles gambiae. They are most abundant in A. gambiae sensu stricto, but related sequences were found in all four other tested members of this species complex. No relatives were found in A. funestus or A. stephensi. Ikirara1, the first isolated family member, was found between two of the tandem Vitellogenin (Vg) genes. Because it was found at this location in G3 and only one of nine other A. gambiae s.s. strains examined, and because its 216 bp inverted terminal repeats are 100% identical, transposition to this locus may have been recent. Ikirara1 inverted repeat terminal sequences are similar to those of DNA to DNA transposons of the mariner/Tc1 and hAT superfamilies. Also similar to mariner/Tc1 elements, insertion of Ikirara1 apparently created a duplication of the dinucleotide TA at the target site.</abstract><cop>Oxford BSL</cop><pub>Blackwell Science Ltd</pub><pmid>9459424</pmid><doi>10.1046/j.1365-2583.1998.71046.x</doi><tpages>10</tpages></addata></record> |
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source | Wiley-Blackwell Read & Publish Collection |
subjects | Animals Anopheles - genetics Anopheles gambiae Base Sequence chromosome mapping copy number DNA DNA Transposable Elements genbank/u55049 gene location Genes, Insect genomics Insect Proteins - genetics Insect Vectors - genetics inverted repeats Malaria - transmission Molecular Sequence Data nucleic acid hybridization nucleotide sequences repetitive sequences transposons |
title | Ikirara, a novel transposon family from the malaria vector mosquito, Anopheles gambiae |
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