Gene expression profiles analysis of the growing rat liver in response to different zinc status by cDNA microarray analysis

• Published in: Biological trace element research 2007-02, Vol.115 (2), p.169-185
• Main Authors: Sun, J Y, Wang, J F, Zi, N T, Jing, M Y, Weng, X Y
• Format: Article
• Language: English
• Subjects: Alkaline Phosphatase - metabolism; Animals; Body weight; Body Weight - drug effects; Deoxyribonucleic acid; Diet; DNA; Gene expression; Gene Expression Profiling - methods; Gene Expression Regulation - drug effects; Kinases; Liver; Liver - drug effects; Liver - growth & development; Liver - metabolism; Male; Oligonucleotide Array Sequence Analysis - methods; Overdose; Proteins; Rats; Rats, Sprague-Dawley; RNA, Messenger - genetics; Rodents; Signal transduction; Zinc; Zinc - pharmacology
• ISSN: 0163-4984; 1559-0720
• DOI: 10.1007/bf02686028

The effects of zinc on growing rats were characterized using the dietary zinc-deficient (ZD) and Zinc-overdose (ZO) models. Zinc deficiency had negative effects on the host final body weight and liver zinc content, whereas zinc overdose had positive effects. In order to identify the molecular changes in the liver responding to dietary zinc status, cDNA microarrays were used to analyze the expression pattern of 9753 genes in the livers of rats fed ZD and ZO diet for 6 wk, compared with zinc-adequate ZA. The mRNA levels for 62 genes were affected significantly by the ZD diet, whereas 66 gene transcriptions were markedly changed in the ZO diet. Those predominant gene products involved in nitrogen metabolism (glutaminase), carbohydrate metabolism (aldolase), lipid metabolism (stearoyl-CoA desaturase), growth (insulin-like growth factor-binding protein), transcription and translation (zinc-finger protein), immune (natural-killer cell), signal transduction (mitogen- activated protein kinase), and ion transportation (ATPase Na+/K+ transporting peptide) were clustered. In conclusion, a number of mammalian genes related to zinc in the liver were identified. The characterization of the genes and their products will allow a more comprehensive analysis of the role of zinc in metabolism. Furthermore, the mRNA identified could be useful in establishing the mechanisms of zinc in the pleiotropic metabolisms in vivo.