The Kappa platform for rule-based modeling

Abstract Motivation We present an overview of the Kappa platform, an integrated suite of analysis and visualization techniques for building and interactively exploring rule-based models. The main components of the platform are the Kappa Simulator, the Kappa Static Analyzer and the Kappa Story Extrac...

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Bibliographic Details
Published in:Bioinformatics 2018-07, Vol.34 (13), p.i583-i592
Main Authors: Boutillier, Pierre, Maasha, Mutaamba, Li, Xing, Medina-Abarca, Héctor F, Krivine, Jean, Feret, Jérôme, Cristescu, Ioana, Forbes, Angus G, Fontana, Walter
Format: Article
Language:English
Subjects:
bioinformatics
Computational Biology - methods
Computer Science
Data Visualization
Distributed, Parallel, and Cluster Computing
Epidermal Growth Factor - metabolism
Internet
Ismb 2018–Intelligent Systems for Molecular Biology Proceedings
Life Sciences
Models, Biological
polymerization
Quantitative Methods
Signal Transduction
Software
user interface
Wnt Signaling Pathway
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