Loading…
Investigating the potential of monocyclic B 9 N 9 and C 18 rings for the electrochemical sensing, and adsorption of carbazole-based anti-cancer drug derivatives: DFT-based first-principle study
For the first time, the use of monocyclic rings C and B N as sensors for the sensing of carbazole-based anti-cancer drugs, such as tetrahydrocarbazole (THC), mukonal (MKN), murrayanine (MRY), and ellipticine (EPT), is described using DFT simulations and computational characterization. The geometries...
Saved in:
Published in: | Journal of molecular modeling 2024-07, Vol.30 (8), p.245 |
---|---|
Main Authors: | , , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | |
---|---|
cites | |
container_end_page | |
container_issue | 8 |
container_start_page | 245 |
container_title | Journal of molecular modeling |
container_volume | 30 |
creator | Niamat, Yumna Yaqoob, Junaid Khan, Muhammad Usman Hussain, Riaz Gilani, Mazhar Amjad Hassan, Abrar Ul Ahamad, Tansir |
description | For the first time, the use of monocyclic rings C
and B
N
as sensors for the sensing of carbazole-based anti-cancer drugs, such as tetrahydrocarbazole (THC), mukonal (MKN), murrayanine (MRY), and ellipticine (EPT), is described using DFT simulations and computational characterization. The geometries, electronic properties, stability studies, sensitivity, and adsorption capabilities of C
and B
N
counterparts towards the selected compounds confirm that the analytes interact through active cavities of the C
and B
N
rings of the complexes.
Based on the interaction energies, the sensitivity of surfaces towards EPT, MKN, MRY, and THC analytes is observed. The interaction energy of EPT@B
N
, MKN@B
N
, MRY@B
N
and THC@B
N
complexes are observed - 20.40, - 19.49, - 20.07, and - 18.27 kcal/mol respectively which is more exothermic than EPT@C
, MKN@C
, MRY@C
, and THC@C
complexes are - 16.37, - 13.97, - 13.96, and - 11.39 kcal/mol respectively. According to findings from the quantum theory of atoms in molecules (QTAIM) and the reduced density gradient (RDG), dispersion forces play a significant role in maintaining the stability of these complexes. The electronic properties including FMOs, density of states (DOS), natural bond orbitals (NBO), charge transfer, and absorption studies are carried out. In comparison of B
N
and C
, the analyte recovery time for C
is much shorter (9.91 × 10
for THC@C
) than that for B
N
shorter recovery time value of 3.75 × 10
for EPT@B
N
. These results suggest that our reported sensors B
N
and C
make it faster to detect adsorbed molecules at room temperature. The sensor response is more prominent in B
N
due to its fine energy gap and high adsorption energy. Consequently, it is possible to think of these monocyclic systems as a potential material for sensor applications. |
doi_str_mv | 10.1007/s00894-024-06049-1 |
format | article |
fullrecord | <record><control><sourceid>pubmed</sourceid><recordid>TN_cdi_pubmed_primary_38960925</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>38960925</sourcerecordid><originalsourceid>FETCH-pubmed_primary_389609253</originalsourceid><addsrcrecordid>eNqFj01OwzAQhS0kRCvoBVigOQCGyS8xSwpV2bDqvnKcSWqU2JHtVAq342aYqqxZPM1ivjfvDWO3CT4kiE-PHrESOcc0qsRc8OSCLVHkFS8wzRZs5f0nIiZpURZpesUWWSVKFGmxZN_v5kg-6E4GbToIB4LRBjJByx5sC4M1Vs2q1wpeQMBHlDQNrCGpwEWHh9a6k416UsFZdaBBq2j2ZHwE7k-8bLx1Y9DW_B5V0tXyy_bEa-kpbmMcV9IoctC4qYOGnD7GRrHaM7xudmeu1c4HPsZcpceewIepmW_YZSt7T6vzvGZ3m7fdesvHqR6o2Ud8kG7e__2c_Qv8ADIHavU</addsrcrecordid><sourcetype>Index Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Investigating the potential of monocyclic B 9 N 9 and C 18 rings for the electrochemical sensing, and adsorption of carbazole-based anti-cancer drug derivatives: DFT-based first-principle study</title><source>Springer Link</source><creator>Niamat, Yumna ; Yaqoob, Junaid ; Khan, Muhammad Usman ; Hussain, Riaz ; Gilani, Mazhar Amjad ; Hassan, Abrar Ul ; Ahamad, Tansir</creator><creatorcontrib>Niamat, Yumna ; Yaqoob, Junaid ; Khan, Muhammad Usman ; Hussain, Riaz ; Gilani, Mazhar Amjad ; Hassan, Abrar Ul ; Ahamad, Tansir</creatorcontrib><description>For the first time, the use of monocyclic rings C
and B
N
as sensors for the sensing of carbazole-based anti-cancer drugs, such as tetrahydrocarbazole (THC), mukonal (MKN), murrayanine (MRY), and ellipticine (EPT), is described using DFT simulations and computational characterization. The geometries, electronic properties, stability studies, sensitivity, and adsorption capabilities of C
and B
N
counterparts towards the selected compounds confirm that the analytes interact through active cavities of the C
and B
N
rings of the complexes.
Based on the interaction energies, the sensitivity of surfaces towards EPT, MKN, MRY, and THC analytes is observed. The interaction energy of EPT@B
N
, MKN@B
N
, MRY@B
N
and THC@B
N
complexes are observed - 20.40, - 19.49, - 20.07, and - 18.27 kcal/mol respectively which is more exothermic than EPT@C
, MKN@C
, MRY@C
, and THC@C
complexes are - 16.37, - 13.97, - 13.96, and - 11.39 kcal/mol respectively. According to findings from the quantum theory of atoms in molecules (QTAIM) and the reduced density gradient (RDG), dispersion forces play a significant role in maintaining the stability of these complexes. The electronic properties including FMOs, density of states (DOS), natural bond orbitals (NBO), charge transfer, and absorption studies are carried out. In comparison of B
N
and C
, the analyte recovery time for C
is much shorter (9.91 × 10
for THC@C
) than that for B
N
shorter recovery time value of 3.75 × 10
for EPT@B
N
. These results suggest that our reported sensors B
N
and C
make it faster to detect adsorbed molecules at room temperature. The sensor response is more prominent in B
N
due to its fine energy gap and high adsorption energy. Consequently, it is possible to think of these monocyclic systems as a potential material for sensor applications.</description><identifier>EISSN: 0948-5023</identifier><identifier>DOI: 10.1007/s00894-024-06049-1</identifier><identifier>PMID: 38960925</identifier><language>eng</language><publisher>Germany</publisher><subject>Adsorption ; Antineoplastic Agents - chemistry ; Carbazoles - chemistry ; Density Functional Theory ; Electrochemical Techniques - methods ; Models, Molecular ; Molecular Structure</subject><ispartof>Journal of molecular modeling, 2024-07, Vol.30 (8), p.245</ispartof><rights>2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38960925$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Niamat, Yumna</creatorcontrib><creatorcontrib>Yaqoob, Junaid</creatorcontrib><creatorcontrib>Khan, Muhammad Usman</creatorcontrib><creatorcontrib>Hussain, Riaz</creatorcontrib><creatorcontrib>Gilani, Mazhar Amjad</creatorcontrib><creatorcontrib>Hassan, Abrar Ul</creatorcontrib><creatorcontrib>Ahamad, Tansir</creatorcontrib><title>Investigating the potential of monocyclic B 9 N 9 and C 18 rings for the electrochemical sensing, and adsorption of carbazole-based anti-cancer drug derivatives: DFT-based first-principle study</title><title>Journal of molecular modeling</title><addtitle>J Mol Model</addtitle><description>For the first time, the use of monocyclic rings C
and B
N
as sensors for the sensing of carbazole-based anti-cancer drugs, such as tetrahydrocarbazole (THC), mukonal (MKN), murrayanine (MRY), and ellipticine (EPT), is described using DFT simulations and computational characterization. The geometries, electronic properties, stability studies, sensitivity, and adsorption capabilities of C
and B
N
counterparts towards the selected compounds confirm that the analytes interact through active cavities of the C
and B
N
rings of the complexes.
Based on the interaction energies, the sensitivity of surfaces towards EPT, MKN, MRY, and THC analytes is observed. The interaction energy of EPT@B
N
, MKN@B
N
, MRY@B
N
and THC@B
N
complexes are observed - 20.40, - 19.49, - 20.07, and - 18.27 kcal/mol respectively which is more exothermic than EPT@C
, MKN@C
, MRY@C
, and THC@C
complexes are - 16.37, - 13.97, - 13.96, and - 11.39 kcal/mol respectively. According to findings from the quantum theory of atoms in molecules (QTAIM) and the reduced density gradient (RDG), dispersion forces play a significant role in maintaining the stability of these complexes. The electronic properties including FMOs, density of states (DOS), natural bond orbitals (NBO), charge transfer, and absorption studies are carried out. In comparison of B
N
and C
, the analyte recovery time for C
is much shorter (9.91 × 10
for THC@C
) than that for B
N
shorter recovery time value of 3.75 × 10
for EPT@B
N
. These results suggest that our reported sensors B
N
and C
make it faster to detect adsorbed molecules at room temperature. The sensor response is more prominent in B
N
due to its fine energy gap and high adsorption energy. Consequently, it is possible to think of these monocyclic systems as a potential material for sensor applications.</description><subject>Adsorption</subject><subject>Antineoplastic Agents - chemistry</subject><subject>Carbazoles - chemistry</subject><subject>Density Functional Theory</subject><subject>Electrochemical Techniques - methods</subject><subject>Models, Molecular</subject><subject>Molecular Structure</subject><issn>0948-5023</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqFj01OwzAQhS0kRCvoBVigOQCGyS8xSwpV2bDqvnKcSWqU2JHtVAq342aYqqxZPM1ivjfvDWO3CT4kiE-PHrESOcc0qsRc8OSCLVHkFS8wzRZs5f0nIiZpURZpesUWWSVKFGmxZN_v5kg-6E4GbToIB4LRBjJByx5sC4M1Vs2q1wpeQMBHlDQNrCGpwEWHh9a6k416UsFZdaBBq2j2ZHwE7k-8bLx1Y9DW_B5V0tXyy_bEa-kpbmMcV9IoctC4qYOGnD7GRrHaM7xudmeu1c4HPsZcpceewIepmW_YZSt7T6vzvGZ3m7fdesvHqR6o2Ud8kG7e__2c_Qv8ADIHavU</recordid><startdate>20240703</startdate><enddate>20240703</enddate><creator>Niamat, Yumna</creator><creator>Yaqoob, Junaid</creator><creator>Khan, Muhammad Usman</creator><creator>Hussain, Riaz</creator><creator>Gilani, Mazhar Amjad</creator><creator>Hassan, Abrar Ul</creator><creator>Ahamad, Tansir</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope></search><sort><creationdate>20240703</creationdate><title>Investigating the potential of monocyclic B 9 N 9 and C 18 rings for the electrochemical sensing, and adsorption of carbazole-based anti-cancer drug derivatives: DFT-based first-principle study</title><author>Niamat, Yumna ; Yaqoob, Junaid ; Khan, Muhammad Usman ; Hussain, Riaz ; Gilani, Mazhar Amjad ; Hassan, Abrar Ul ; Ahamad, Tansir</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-pubmed_primary_389609253</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adsorption</topic><topic>Antineoplastic Agents - chemistry</topic><topic>Carbazoles - chemistry</topic><topic>Density Functional Theory</topic><topic>Electrochemical Techniques - methods</topic><topic>Models, Molecular</topic><topic>Molecular Structure</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Niamat, Yumna</creatorcontrib><creatorcontrib>Yaqoob, Junaid</creatorcontrib><creatorcontrib>Khan, Muhammad Usman</creatorcontrib><creatorcontrib>Hussain, Riaz</creatorcontrib><creatorcontrib>Gilani, Mazhar Amjad</creatorcontrib><creatorcontrib>Hassan, Abrar Ul</creatorcontrib><creatorcontrib>Ahamad, Tansir</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><jtitle>Journal of molecular modeling</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Niamat, Yumna</au><au>Yaqoob, Junaid</au><au>Khan, Muhammad Usman</au><au>Hussain, Riaz</au><au>Gilani, Mazhar Amjad</au><au>Hassan, Abrar Ul</au><au>Ahamad, Tansir</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Investigating the potential of monocyclic B 9 N 9 and C 18 rings for the electrochemical sensing, and adsorption of carbazole-based anti-cancer drug derivatives: DFT-based first-principle study</atitle><jtitle>Journal of molecular modeling</jtitle><addtitle>J Mol Model</addtitle><date>2024-07-03</date><risdate>2024</risdate><volume>30</volume><issue>8</issue><spage>245</spage><pages>245-</pages><eissn>0948-5023</eissn><abstract>For the first time, the use of monocyclic rings C
and B
N
as sensors for the sensing of carbazole-based anti-cancer drugs, such as tetrahydrocarbazole (THC), mukonal (MKN), murrayanine (MRY), and ellipticine (EPT), is described using DFT simulations and computational characterization. The geometries, electronic properties, stability studies, sensitivity, and adsorption capabilities of C
and B
N
counterparts towards the selected compounds confirm that the analytes interact through active cavities of the C
and B
N
rings of the complexes.
Based on the interaction energies, the sensitivity of surfaces towards EPT, MKN, MRY, and THC analytes is observed. The interaction energy of EPT@B
N
, MKN@B
N
, MRY@B
N
and THC@B
N
complexes are observed - 20.40, - 19.49, - 20.07, and - 18.27 kcal/mol respectively which is more exothermic than EPT@C
, MKN@C
, MRY@C
, and THC@C
complexes are - 16.37, - 13.97, - 13.96, and - 11.39 kcal/mol respectively. According to findings from the quantum theory of atoms in molecules (QTAIM) and the reduced density gradient (RDG), dispersion forces play a significant role in maintaining the stability of these complexes. The electronic properties including FMOs, density of states (DOS), natural bond orbitals (NBO), charge transfer, and absorption studies are carried out. In comparison of B
N
and C
, the analyte recovery time for C
is much shorter (9.91 × 10
for THC@C
) than that for B
N
shorter recovery time value of 3.75 × 10
for EPT@B
N
. These results suggest that our reported sensors B
N
and C
make it faster to detect adsorbed molecules at room temperature. The sensor response is more prominent in B
N
due to its fine energy gap and high adsorption energy. Consequently, it is possible to think of these monocyclic systems as a potential material for sensor applications.</abstract><cop>Germany</cop><pmid>38960925</pmid><doi>10.1007/s00894-024-06049-1</doi></addata></record> |
fulltext | fulltext |
identifier | EISSN: 0948-5023 |
ispartof | Journal of molecular modeling, 2024-07, Vol.30 (8), p.245 |
issn | 0948-5023 |
language | eng |
recordid | cdi_pubmed_primary_38960925 |
source | Springer Link |
subjects | Adsorption Antineoplastic Agents - chemistry Carbazoles - chemistry Density Functional Theory Electrochemical Techniques - methods Models, Molecular Molecular Structure |
title | Investigating the potential of monocyclic B 9 N 9 and C 18 rings for the electrochemical sensing, and adsorption of carbazole-based anti-cancer drug derivatives: DFT-based first-principle study |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-08T13%3A08%3A38IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-pubmed&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Investigating%20the%20potential%20of%20monocyclic%20B%209%20N%209%20and%20C%2018%20rings%20for%20the%20electrochemical%20sensing,%20and%20adsorption%20of%20carbazole-based%20anti-cancer%20drug%20derivatives:%20DFT-based%20first-principle%20study&rft.jtitle=Journal%20of%20molecular%20modeling&rft.au=Niamat,%20Yumna&rft.date=2024-07-03&rft.volume=30&rft.issue=8&rft.spage=245&rft.pages=245-&rft.eissn=0948-5023&rft_id=info:doi/10.1007/s00894-024-06049-1&rft_dat=%3Cpubmed%3E38960925%3C/pubmed%3E%3Cgrp_id%3Ecdi_FETCH-pubmed_primary_389609253%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_id=info:pmid/38960925&rfr_iscdi=true |