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HLA-A, HLA-B, and HLA-DRB1 Allele and Haplotype Frequencies in Renal Transplant Candidates in a Population in Southern Brazil

Background Very few studies have examined the diversity of human leukocyte antigens (HLA) in the Brazilian renal transplant candidates. Methods The frequencies of the HLA‐A, HLA‐B, and HLA‐DRB1 alleles, haplotypes and phenotypes were studied in 522 patients with chronic renal failure, renal transpla...

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Published in:Journal of clinical laboratory analysis 2016-05, Vol.30 (3), p.258-265
Main Authors: Saito, Patrícia Keiko, Yamakawa, Roger Haruki, Noguti, Erika Noda, Bedendo, Gustavo Borelli, Júnior, Waldir Veríssimo da Silva, Yamada, Sérgio Seiji, Borelli, Sueli Donizete
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container_title Journal of clinical laboratory analysis
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creator Saito, Patrícia Keiko
Yamakawa, Roger Haruki
Noguti, Erika Noda
Bedendo, Gustavo Borelli
Júnior, Waldir Veríssimo da Silva
Yamada, Sérgio Seiji
Borelli, Sueli Donizete
description Background Very few studies have examined the diversity of human leukocyte antigens (HLA) in the Brazilian renal transplant candidates. Methods The frequencies of the HLA‐A, HLA‐B, and HLA‐DRB1 alleles, haplotypes and phenotypes were studied in 522 patients with chronic renal failure, renal transplant candidates, registered at the Transplant Centers in north/northwestern Paraná State, southern Brazil. Patients were classified according to the ethnic group (319 whites [Caucasians], 134 mestizos [mixed race descendants of Europeans, Africans, and Amerindians; browns or “pardos”] and 69 blacks). The HLA typing was performed by the polymerase chain reaction sequence‐specific oligonucleotide method (PCR‐SSO), combined with Luminex technology. Results In the analysis of the total samples, 20 HLA‐A, 32 HLA‐B, and 13 HLA‐DRB1 allele groups were identified. The most frequent allele groups for each HLA locus were HLA‐A*02 (25.4%), HLA‐B*44 (10.9%), and HLA‐DRB1*13 (13.9%). The most frequent haplotypes were HLA‐A*01‐B*08‐DRB1*03 (2.3%), A*02‐B*44‐DRB1*07 (1.2%), and A*03‐B*07‐DRB1*11 (1.0%). Significant differences (P < 0.05) were observed in the HLA‐A*68, B*08, and B*58 allele frequencies among ethnic groups. Conclusions This study provides the first data on the HLA‐A, HLA‐B, and HLA‐DRB1 allele, phenotype and haplotype frequencies of renal transplant candidates in a population in southern Brazil.
doi_str_mv 10.1002/jcla.21846
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Methods The frequencies of the HLA‐A, HLA‐B, and HLA‐DRB1 alleles, haplotypes and phenotypes were studied in 522 patients with chronic renal failure, renal transplant candidates, registered at the Transplant Centers in north/northwestern Paraná State, southern Brazil. Patients were classified according to the ethnic group (319 whites [Caucasians], 134 mestizos [mixed race descendants of Europeans, Africans, and Amerindians; browns or “pardos”] and 69 blacks). The HLA typing was performed by the polymerase chain reaction sequence‐specific oligonucleotide method (PCR‐SSO), combined with Luminex technology. Results In the analysis of the total samples, 20 HLA‐A, 32 HLA‐B, and 13 HLA‐DRB1 allele groups were identified. The most frequent allele groups for each HLA locus were HLA‐A*02 (25.4%), HLA‐B*44 (10.9%), and HLA‐DRB1*13 (13.9%). The most frequent haplotypes were HLA‐A*01‐B*08‐DRB1*03 (2.3%), A*02‐B*44‐DRB1*07 (1.2%), and A*03‐B*07‐DRB1*11 (1.0%). Significant differences (P &lt; 0.05) were observed in the HLA‐A*68, B*08, and B*58 allele frequencies among ethnic groups. Conclusions This study provides the first data on the HLA‐A, HLA‐B, and HLA‐DRB1 allele, phenotype and haplotype frequencies of renal transplant candidates in a population in southern Brazil.</description><identifier>ISSN: 0887-8013</identifier><identifier>EISSN: 1098-2825</identifier><identifier>DOI: 10.1002/jcla.21846</identifier><identifier>PMID: 25853623</identifier><language>eng</language><publisher>United States: Blackwell Publishing Ltd</publisher><subject>Alleles ; Antigens ; Brazil ; chronic ; Ethnic Groups - genetics ; Female ; Gene Frequency - genetics ; genetic ; Genotype &amp; phenotype ; Haplotypes - genetics ; HLA antigens ; HLA-A Antigens - genetics ; HLA-B Antigens - genetics ; HLA-DRB1 Chains - genetics ; Humans ; kidney failure ; kidney failure, chronic ; Kidney Transplantation ; Kidneys ; Leukocytes ; major histocompatibility complex ; Male ; Phenotype ; polymorphism ; polymorphism, genetic ; Transplants &amp; implants</subject><ispartof>Journal of clinical laboratory analysis, 2016-05, Vol.30 (3), p.258-265</ispartof><rights>2015 Wiley Periodicals, Inc.</rights><rights>Copyright © 2016 Wiley Periodicals, Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5196-544a823154757ad754ca077567e055c8e697db0efdcf379a0105136191bd791f3</citedby><cites>FETCH-LOGICAL-c5196-544a823154757ad754ca077567e055c8e697db0efdcf379a0105136191bd791f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6807127/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6807127/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25853623$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Saito, Patrícia Keiko</creatorcontrib><creatorcontrib>Yamakawa, Roger Haruki</creatorcontrib><creatorcontrib>Noguti, Erika Noda</creatorcontrib><creatorcontrib>Bedendo, Gustavo Borelli</creatorcontrib><creatorcontrib>Júnior, Waldir Veríssimo da Silva</creatorcontrib><creatorcontrib>Yamada, Sérgio Seiji</creatorcontrib><creatorcontrib>Borelli, Sueli Donizete</creatorcontrib><title>HLA-A, HLA-B, and HLA-DRB1 Allele and Haplotype Frequencies in Renal Transplant Candidates in a Population in Southern Brazil</title><title>Journal of clinical laboratory analysis</title><addtitle>J. Clin. Lab. Anal</addtitle><description>Background Very few studies have examined the diversity of human leukocyte antigens (HLA) in the Brazilian renal transplant candidates. Methods The frequencies of the HLA‐A, HLA‐B, and HLA‐DRB1 alleles, haplotypes and phenotypes were studied in 522 patients with chronic renal failure, renal transplant candidates, registered at the Transplant Centers in north/northwestern Paraná State, southern Brazil. Patients were classified according to the ethnic group (319 whites [Caucasians], 134 mestizos [mixed race descendants of Europeans, Africans, and Amerindians; browns or “pardos”] and 69 blacks). The HLA typing was performed by the polymerase chain reaction sequence‐specific oligonucleotide method (PCR‐SSO), combined with Luminex technology. Results In the analysis of the total samples, 20 HLA‐A, 32 HLA‐B, and 13 HLA‐DRB1 allele groups were identified. The most frequent allele groups for each HLA locus were HLA‐A*02 (25.4%), HLA‐B*44 (10.9%), and HLA‐DRB1*13 (13.9%). The most frequent haplotypes were HLA‐A*01‐B*08‐DRB1*03 (2.3%), A*02‐B*44‐DRB1*07 (1.2%), and A*03‐B*07‐DRB1*11 (1.0%). Significant differences (P &lt; 0.05) were observed in the HLA‐A*68, B*08, and B*58 allele frequencies among ethnic groups. Conclusions This study provides the first data on the HLA‐A, HLA‐B, and HLA‐DRB1 allele, phenotype and haplotype frequencies of renal transplant candidates in a population in southern Brazil.</description><subject>Alleles</subject><subject>Antigens</subject><subject>Brazil</subject><subject>chronic</subject><subject>Ethnic Groups - genetics</subject><subject>Female</subject><subject>Gene Frequency - genetics</subject><subject>genetic</subject><subject>Genotype &amp; phenotype</subject><subject>Haplotypes - genetics</subject><subject>HLA antigens</subject><subject>HLA-A Antigens - genetics</subject><subject>HLA-B Antigens - genetics</subject><subject>HLA-DRB1 Chains - genetics</subject><subject>Humans</subject><subject>kidney failure</subject><subject>kidney failure, chronic</subject><subject>Kidney Transplantation</subject><subject>Kidneys</subject><subject>Leukocytes</subject><subject>major histocompatibility complex</subject><subject>Male</subject><subject>Phenotype</subject><subject>polymorphism</subject><subject>polymorphism, genetic</subject><subject>Transplants &amp; 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phenotype</topic><topic>Haplotypes - genetics</topic><topic>HLA antigens</topic><topic>HLA-A Antigens - genetics</topic><topic>HLA-B Antigens - genetics</topic><topic>HLA-DRB1 Chains - genetics</topic><topic>Humans</topic><topic>kidney failure</topic><topic>kidney failure, chronic</topic><topic>Kidney Transplantation</topic><topic>Kidneys</topic><topic>Leukocytes</topic><topic>major histocompatibility complex</topic><topic>Male</topic><topic>Phenotype</topic><topic>polymorphism</topic><topic>polymorphism, genetic</topic><topic>Transplants &amp; implants</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Saito, Patrícia Keiko</creatorcontrib><creatorcontrib>Yamakawa, Roger Haruki</creatorcontrib><creatorcontrib>Noguti, Erika Noda</creatorcontrib><creatorcontrib>Bedendo, Gustavo Borelli</creatorcontrib><creatorcontrib>Júnior, Waldir Veríssimo da Silva</creatorcontrib><creatorcontrib>Yamada, Sérgio Seiji</creatorcontrib><creatorcontrib>Borelli, Sueli Donizete</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium &amp; 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Clin. Lab. Anal</addtitle><date>2016-05</date><risdate>2016</risdate><volume>30</volume><issue>3</issue><spage>258</spage><epage>265</epage><pages>258-265</pages><issn>0887-8013</issn><eissn>1098-2825</eissn><abstract>Background Very few studies have examined the diversity of human leukocyte antigens (HLA) in the Brazilian renal transplant candidates. Methods The frequencies of the HLA‐A, HLA‐B, and HLA‐DRB1 alleles, haplotypes and phenotypes were studied in 522 patients with chronic renal failure, renal transplant candidates, registered at the Transplant Centers in north/northwestern Paraná State, southern Brazil. Patients were classified according to the ethnic group (319 whites [Caucasians], 134 mestizos [mixed race descendants of Europeans, Africans, and Amerindians; browns or “pardos”] and 69 blacks). The HLA typing was performed by the polymerase chain reaction sequence‐specific oligonucleotide method (PCR‐SSO), combined with Luminex technology. Results In the analysis of the total samples, 20 HLA‐A, 32 HLA‐B, and 13 HLA‐DRB1 allele groups were identified. The most frequent allele groups for each HLA locus were HLA‐A*02 (25.4%), HLA‐B*44 (10.9%), and HLA‐DRB1*13 (13.9%). The most frequent haplotypes were HLA‐A*01‐B*08‐DRB1*03 (2.3%), A*02‐B*44‐DRB1*07 (1.2%), and A*03‐B*07‐DRB1*11 (1.0%). Significant differences (P &lt; 0.05) were observed in the HLA‐A*68, B*08, and B*58 allele frequencies among ethnic groups. Conclusions This study provides the first data on the HLA‐A, HLA‐B, and HLA‐DRB1 allele, phenotype and haplotype frequencies of renal transplant candidates in a population in southern Brazil.</abstract><cop>United States</cop><pub>Blackwell Publishing Ltd</pub><pmid>25853623</pmid><doi>10.1002/jcla.21846</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record>
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subjects Alleles
Antigens
Brazil
chronic
Ethnic Groups - genetics
Female
Gene Frequency - genetics
genetic
Genotype & phenotype
Haplotypes - genetics
HLA antigens
HLA-A Antigens - genetics
HLA-B Antigens - genetics
HLA-DRB1 Chains - genetics
Humans
kidney failure
kidney failure, chronic
Kidney Transplantation
Kidneys
Leukocytes
major histocompatibility complex
Male
Phenotype
polymorphism
polymorphism, genetic
Transplants & implants
title HLA-A, HLA-B, and HLA-DRB1 Allele and Haplotype Frequencies in Renal Transplant Candidates in a Population in Southern Brazil
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