ViroMatch: A Computational Pipeline for the Detection of Viral Sequences from Complex Metagenomic Data

ViroMatch is an automated pipeline that takes metagenomic sequencing reads as input and performs iterative nucleotide and translated nucleotide mapping to identify viral sequences. We provide a Docker image for ViroMatch, so that users will not have to install dependencies.

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Published in:Microbiology resource announcements 2021-03, Vol.10 (9)
Main Authors: Wylie, Todd N, Wylie, Kristine M
Format: Article
Language:English
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Databases and Software
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description ViroMatch is an automated pipeline that takes metagenomic sequencing reads as input and performs iterative nucleotide and translated nucleotide mapping to identify viral sequences. We provide a Docker image for ViroMatch, so that users will not have to install dependencies.
doi_str_mv 10.1128/MRA.01468-20
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title ViroMatch: A Computational Pipeline for the Detection of Viral Sequences from Complex Metagenomic Data
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