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Determination of potential N2O-reductase activity in soil
Determination of N2O-reductase activity in soil is important for understanding the microbial regulation of nitrous oxide (N2O) concentrations in soil. Unfortunately, there are no easily applicable and accurate methods for determining N2O-reductase activity, which frustrates the understanding of the...
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Published in: | Soil biology & biochemistry 2014-03, Vol.70, p.205-210 |
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description | Determination of N2O-reductase activity in soil is important for understanding the microbial regulation of nitrous oxide (N2O) concentrations in soil. Unfortunately, there are no easily applicable and accurate methods for determining N2O-reductase activity, which frustrates the understanding of the mechanisms that control soil management effects on denitrification and N2O emissions. The objectives of the study reported here were (i) to define the optimal experimental conditions for the determination of potential N2O-reductase activity in soil, (ii) to compare the direct-N2 method with the acetylene inhibition technique, and (iii) to investigate the effects of long-term nitrogen (N) fertilization on the potential N2O-reductase activity.
Various substrate concentrations, water/soil ratios, incubation times, temperatures and pH values were tested to find the optimal conditions for the potential N2O-reductase activity in soils from two sites. Then, the potential N2O-reductase activity was determined under optimal conditions (10 g soil, 10 ml buffer solution, pH 9, 40 °C, 100 ppmv N2O) in soils from the long-term N fertilization experiment.
There were significant differences between soils in potential N2O-reductase activity, but the optimal experimental conditions were similar. The acetylene inhibition technique underestimated N2O-reductase activity in soil relative to the direct-N2 method, especially in the treatment where fertilizer N was withheld for 15 yrs. We recommend that the optimal experimental conditions for the determination of the potential N2O-reductase activity are established also for other soils. More studies are needed to fully understand the interactive effects of long-term N fertilization on nosZ gene expression and N2O-reductase activity in soils.
•Soil N2O-reductase activity was assayed by direct-N2 and C2H2 inhibition methods.•The Direct-N2 method was superior to C2H2 inhibition in non-fertilized soils.•Moderate N rate lead to relatively lower N2O-reductase activity. |
doi_str_mv | 10.1016/j.soilbio.2013.12.027 |
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Various substrate concentrations, water/soil ratios, incubation times, temperatures and pH values were tested to find the optimal conditions for the potential N2O-reductase activity in soils from two sites. Then, the potential N2O-reductase activity was determined under optimal conditions (10 g soil, 10 ml buffer solution, pH 9, 40 °C, 100 ppmv N2O) in soils from the long-term N fertilization experiment.
There were significant differences between soils in potential N2O-reductase activity, but the optimal experimental conditions were similar. The acetylene inhibition technique underestimated N2O-reductase activity in soil relative to the direct-N2 method, especially in the treatment where fertilizer N was withheld for 15 yrs. We recommend that the optimal experimental conditions for the determination of the potential N2O-reductase activity are established also for other soils. More studies are needed to fully understand the interactive effects of long-term N fertilization on nosZ gene expression and N2O-reductase activity in soils.
•Soil N2O-reductase activity was assayed by direct-N2 and C2H2 inhibition methods.•The Direct-N2 method was superior to C2H2 inhibition in non-fertilized soils.•Moderate N rate lead to relatively lower N2O-reductase activity.</description><identifier>ISSN: 0038-0717</identifier><identifier>EISSN: 1879-3428</identifier><identifier>DOI: 10.1016/j.soilbio.2013.12.027</identifier><identifier>CODEN: SBIOAH</identifier><language>eng</language><publisher>Amsterdam: Elsevier Ltd</publisher><subject>Acetylene inhibition ; acetylene inhibition technique ; Agronomy. Soil science and plant productions ; aquatic sediments ; Biochemistry and biology ; Biological and medical sciences ; Chemical, physicochemical, biochemical and biological properties ; community composition ; denitrification ; denitrifying bacteria ; Di-nitrogen emission ; enzyme-activity ; Fundamental and applied biological sciences. Psychology ; General agronomy. Plant production ; marine-sediments ; n2o reduction ; N2O sink ; N2O-reductase activity ; Nitrogen application ; Nitrogen, phosphorus, potassium fertilizations ; Nitrous oxide ; nitrous-oxide reduction ; Physics, chemistry, biochemistry and biology of agricultural and forest soils ; pseudomonas-mandelii ; Soil science ; Soil-plant relationships. Soil fertility. Fertilization. Amendments</subject><ispartof>Soil biology & biochemistry, 2014-03, Vol.70, p.205-210</ispartof><rights>2014 Elsevier Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Wageningen University & Research</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c423t-f2defc92f5b03b685716267c72e7a1b94b4f5f6bd7e255186f643043016e93fc3</citedby><cites>FETCH-LOGICAL-c423t-f2defc92f5b03b685716267c72e7a1b94b4f5f6bd7e255186f643043016e93fc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27923,27924</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28312491$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Qin, Shuping</creatorcontrib><creatorcontrib>Yuan, Haijing</creatorcontrib><creatorcontrib>Hu, Chunsheng</creatorcontrib><creatorcontrib>Oenema, Oene</creatorcontrib><creatorcontrib>Zhang, Yuming</creatorcontrib><creatorcontrib>Li, Xiaoxin</creatorcontrib><title>Determination of potential N2O-reductase activity in soil</title><title>Soil biology & biochemistry</title><description>Determination of N2O-reductase activity in soil is important for understanding the microbial regulation of nitrous oxide (N2O) concentrations in soil. Unfortunately, there are no easily applicable and accurate methods for determining N2O-reductase activity, which frustrates the understanding of the mechanisms that control soil management effects on denitrification and N2O emissions. The objectives of the study reported here were (i) to define the optimal experimental conditions for the determination of potential N2O-reductase activity in soil, (ii) to compare the direct-N2 method with the acetylene inhibition technique, and (iii) to investigate the effects of long-term nitrogen (N) fertilization on the potential N2O-reductase activity.
Various substrate concentrations, water/soil ratios, incubation times, temperatures and pH values were tested to find the optimal conditions for the potential N2O-reductase activity in soils from two sites. Then, the potential N2O-reductase activity was determined under optimal conditions (10 g soil, 10 ml buffer solution, pH 9, 40 °C, 100 ppmv N2O) in soils from the long-term N fertilization experiment.
There were significant differences between soils in potential N2O-reductase activity, but the optimal experimental conditions were similar. The acetylene inhibition technique underestimated N2O-reductase activity in soil relative to the direct-N2 method, especially in the treatment where fertilizer N was withheld for 15 yrs. We recommend that the optimal experimental conditions for the determination of the potential N2O-reductase activity are established also for other soils. More studies are needed to fully understand the interactive effects of long-term N fertilization on nosZ gene expression and N2O-reductase activity in soils.
•Soil N2O-reductase activity was assayed by direct-N2 and C2H2 inhibition methods.•The Direct-N2 method was superior to C2H2 inhibition in non-fertilized soils.•Moderate N rate lead to relatively lower N2O-reductase activity.</description><subject>Acetylene inhibition</subject><subject>acetylene inhibition technique</subject><subject>Agronomy. Soil science and plant productions</subject><subject>aquatic sediments</subject><subject>Biochemistry and biology</subject><subject>Biological and medical sciences</subject><subject>Chemical, physicochemical, biochemical and biological properties</subject><subject>community composition</subject><subject>denitrification</subject><subject>denitrifying bacteria</subject><subject>Di-nitrogen emission</subject><subject>enzyme-activity</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General agronomy. Plant production</subject><subject>marine-sediments</subject><subject>n2o reduction</subject><subject>N2O sink</subject><subject>N2O-reductase activity</subject><subject>Nitrogen application</subject><subject>Nitrogen, phosphorus, potassium fertilizations</subject><subject>Nitrous oxide</subject><subject>nitrous-oxide reduction</subject><subject>Physics, chemistry, biochemistry and biology of agricultural and forest soils</subject><subject>pseudomonas-mandelii</subject><subject>Soil science</subject><subject>Soil-plant relationships. Soil fertility. Fertilization. Amendments</subject><issn>0038-0717</issn><issn>1879-3428</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqFkE1r3DAQhkVoIdu0P6HgS6EXOxrJ-nAvpaRJUwjNpT0LWR4VLV5pK8kJ-fe12e25MMxc3o_hIeQ90A4oyOt9V1KYx5A6RoF3wDrK1AXZgVZDy3umX5EdpVy3VIG6JG9K2VNKmQC-I8NXrJgPIdoaUmySb46pYqzBzs0P9thmnBZXbcHGuhqeQn1pQmy2vrfktbdzwXfne0V-3d3-vLlvHx6_fb_58tC6nvHaejahdwPzYqR8lFookEwqpxgqC-PQj70XXo6TQiYEaOllz-k6IHHg3vEr8umU-2x_YwxxXSba7EIxyQYzhzHb_GKel2zivJ3jMhbTD5TCsJo_nszHnP4sWKo5hOJwnm3EtBQDAqQSVGu9SsVJ6nIqJaM3xxwOWzRQs3E2e3PmbDbOBphZOa--D-cKW5ydfbZx--2fmWkOrB9g1X0-6XCF9RQwm-ICRodTyOiqmVL4T9Nf49SWxQ</recordid><startdate>20140301</startdate><enddate>20140301</enddate><creator>Qin, Shuping</creator><creator>Yuan, Haijing</creator><creator>Hu, Chunsheng</creator><creator>Oenema, Oene</creator><creator>Zhang, Yuming</creator><creator>Li, Xiaoxin</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7UA</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>QVL</scope></search><sort><creationdate>20140301</creationdate><title>Determination of potential N2O-reductase activity in soil</title><author>Qin, Shuping ; Yuan, Haijing ; Hu, Chunsheng ; Oenema, Oene ; Zhang, Yuming ; Li, Xiaoxin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-f2defc92f5b03b685716267c72e7a1b94b4f5f6bd7e255186f643043016e93fc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Acetylene inhibition</topic><topic>acetylene inhibition technique</topic><topic>Agronomy. Soil science and plant productions</topic><topic>aquatic sediments</topic><topic>Biochemistry and biology</topic><topic>Biological and medical sciences</topic><topic>Chemical, physicochemical, biochemical and biological properties</topic><topic>community composition</topic><topic>denitrification</topic><topic>denitrifying bacteria</topic><topic>Di-nitrogen emission</topic><topic>enzyme-activity</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>General agronomy. Plant production</topic><topic>marine-sediments</topic><topic>n2o reduction</topic><topic>N2O sink</topic><topic>N2O-reductase activity</topic><topic>Nitrogen application</topic><topic>Nitrogen, phosphorus, potassium fertilizations</topic><topic>Nitrous oxide</topic><topic>nitrous-oxide reduction</topic><topic>Physics, chemistry, biochemistry and biology of agricultural and forest soils</topic><topic>pseudomonas-mandelii</topic><topic>Soil science</topic><topic>Soil-plant relationships. Soil fertility. Fertilization. Amendments</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Qin, Shuping</creatorcontrib><creatorcontrib>Yuan, Haijing</creatorcontrib><creatorcontrib>Hu, Chunsheng</creatorcontrib><creatorcontrib>Oenema, Oene</creatorcontrib><creatorcontrib>Zhang, Yuming</creatorcontrib><creatorcontrib>Li, Xiaoxin</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Water Resources Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>NARCIS:Publications</collection><jtitle>Soil biology & biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Qin, Shuping</au><au>Yuan, Haijing</au><au>Hu, Chunsheng</au><au>Oenema, Oene</au><au>Zhang, Yuming</au><au>Li, Xiaoxin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Determination of potential N2O-reductase activity in soil</atitle><jtitle>Soil biology & biochemistry</jtitle><date>2014-03-01</date><risdate>2014</risdate><volume>70</volume><spage>205</spage><epage>210</epage><pages>205-210</pages><issn>0038-0717</issn><eissn>1879-3428</eissn><coden>SBIOAH</coden><abstract>Determination of N2O-reductase activity in soil is important for understanding the microbial regulation of nitrous oxide (N2O) concentrations in soil. Unfortunately, there are no easily applicable and accurate methods for determining N2O-reductase activity, which frustrates the understanding of the mechanisms that control soil management effects on denitrification and N2O emissions. The objectives of the study reported here were (i) to define the optimal experimental conditions for the determination of potential N2O-reductase activity in soil, (ii) to compare the direct-N2 method with the acetylene inhibition technique, and (iii) to investigate the effects of long-term nitrogen (N) fertilization on the potential N2O-reductase activity.
Various substrate concentrations, water/soil ratios, incubation times, temperatures and pH values were tested to find the optimal conditions for the potential N2O-reductase activity in soils from two sites. Then, the potential N2O-reductase activity was determined under optimal conditions (10 g soil, 10 ml buffer solution, pH 9, 40 °C, 100 ppmv N2O) in soils from the long-term N fertilization experiment.
There were significant differences between soils in potential N2O-reductase activity, but the optimal experimental conditions were similar. The acetylene inhibition technique underestimated N2O-reductase activity in soil relative to the direct-N2 method, especially in the treatment where fertilizer N was withheld for 15 yrs. We recommend that the optimal experimental conditions for the determination of the potential N2O-reductase activity are established also for other soils. More studies are needed to fully understand the interactive effects of long-term N fertilization on nosZ gene expression and N2O-reductase activity in soils.
•Soil N2O-reductase activity was assayed by direct-N2 and C2H2 inhibition methods.•The Direct-N2 method was superior to C2H2 inhibition in non-fertilized soils.•Moderate N rate lead to relatively lower N2O-reductase activity.</abstract><cop>Amsterdam</cop><pub>Elsevier Ltd</pub><doi>10.1016/j.soilbio.2013.12.027</doi><tpages>6</tpages></addata></record> |
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subjects | Acetylene inhibition acetylene inhibition technique Agronomy. Soil science and plant productions aquatic sediments Biochemistry and biology Biological and medical sciences Chemical, physicochemical, biochemical and biological properties community composition denitrification denitrifying bacteria Di-nitrogen emission enzyme-activity Fundamental and applied biological sciences. Psychology General agronomy. Plant production marine-sediments n2o reduction N2O sink N2O-reductase activity Nitrogen application Nitrogen, phosphorus, potassium fertilizations Nitrous oxide nitrous-oxide reduction Physics, chemistry, biochemistry and biology of agricultural and forest soils pseudomonas-mandelii Soil science Soil-plant relationships. Soil fertility. Fertilization. Amendments |
title | Determination of potential N2O-reductase activity in soil |
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