Structure-directed expansion of biphenyl-pyridone derivatives as potent non-nucleoside reverse transcriptase inhibitors with significantly improved potency and safety

• Published in: Chinese chemical letters 2023-12, Vol.34 (12), p.108261-131, Article 108261
• Main Authors: Zhao, Li-Min, Pannecouque, Christophe, De Clercq, Erik, Wang, Shuai, Chen, Fen-Er
• Format: Article
• Language: English
• Subjects: Biphenyl-pyridone; Doravirine; HIV-1; NNRTI; Safety
• ISSN: 1001-8417; 1878-5964
• DOI: 10.1016/j.cclet.2023.108261

Following our previous work on human immunodeficiency virus-1 (HIV-1) non-nucleoside reverse transcriptase inhibitors (NNRTIs), a series of novel biphenyl-pyridone derivatives were synthesized and evaluated for their anti-HIV-1 activity to expand their structure–activity relationship. Some of them exhibited low nanomolar activity toward wild-type HIV-1 and clinically relevant single/double mutant strains. The most active compound B1 was 231-fold more potent (EC50 = 17 nmol/L) than the lead compound 2 (EC50 = 3.93 μmol/L) against wild-type (WT) HIV-1. This compound was approximately 3.5-fold less cytotoxic (CC50 = 100.58 μmol/L) than compound 2 (CC50 = 28.24 μmol/L), presenting a higher selectivity index (SI) value of 5923. Compared with 2, the antiviral potency of B1 was significantly increased against five single mutant strains (L100I, K103N, E138K, Y181C and Y188L) and two double mutant strains (F227L+V106A and K103N+Y181C). Especially, K103N, Y181C and K103N+Y181C were more sensitive to B1 than both 2 and doravirine. Besides, the enzymatic inhibitory activity of B1 against wild-type HIV-1 reverse transcriptase was approximately 32-fold higher (IC50 = 100 nmol/L) than 2 (IC50 = 3.21 μmol/L). Molecular docking studies and dynamic simulations were conducted to explain their potent activity. Taken together, this research represents an important step toward the discovery of novel biphenyl-pyridone drug candidates for HIV therapy. A series of novel biphenyl-pyridone derivatives were rationally designed, synthesized, and evaluated for their anti-human immunodeficiency virus-1 (HIV-1) activity to expand their structure–activity relationships. [Display omitted]